Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK5Q00535 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK5Q00535 AC018892.3-201ENST00000623986 2499 ntBASIC14.47□□□□□ -0.09
CDK5Q00535 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK5Q00535 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDK5Q00535 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDK5Q00535 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.47□□□□□ -0.09
CDK5Q00535 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.47□□□□□ -0.09
CDK5Q00535 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK5Q00535 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK5Q00535 AC010507.1-201ENST00000633895 436 ntBASIC14.47□□□□□ -0.09
CDK5Q00535 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.47□□□□□ -0.09
CDK5Q00535 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.47□□□□□ -0.09
CDK5Q00535 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDK5Q00535 AC007292.2-201ENST00000593524 1812 ntBASIC14.47□□□□□ -0.09
CDK5Q00535 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDK5Q00535 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 AL691432.1-201ENST00000596308 1422 ntBASIC14.47□□□□□ -0.09
CDK5Q00535 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDK5Q00535 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CDK5Q00535 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDK5Q00535 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CDK5Q00535 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK5Q00535 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.46□□□□□ -0.09
CDK5Q00535 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.46□□□□□ -0.09
CDK5Q00535 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.46□□□□□ -0.09
CDK5Q00535 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.46□□□□□ -0.09
CDK5Q00535 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
CDK5Q00535 AC127383.1-201ENST00000444697 1800 ntBASIC14.46□□□□□ -0.09
CDK5Q00535 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.46□□□□□ -0.09
CDK5Q00535 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDK5Q00535 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.46□□□□□ -0.09
CDK5Q00535 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.46□□□□□ -0.09
CDK5Q00535 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.46□□□□□ -0.09
CDK5Q00535 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.46□□□□□ -0.09
CDK5Q00535 UNC93B6-202ENST00000528242 690 ntBASIC14.46□□□□□ -0.09
CDK5Q00535 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.46□□□□□ -0.09
CDK5Q00535 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.46□□□□□ -0.09
CDK5Q00535 AC243562.2-201ENST00000561247 970 ntBASIC14.46□□□□□ -0.09
CDK5Q00535 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CDK5Q00535 AC007064.4-201ENST00000637740 555 ntBASIC14.46□□□□□ -0.09
CDK5Q00535 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.46□□□□□ -0.09
CDK5Q00535 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.46□□□□□ -0.09
CDK5Q00535 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK5Q00535 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDK5Q00535 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDK5Q00535 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CDK5Q00535 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDK5Q00535 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDK5Q00535 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.46□□□□□ -0.1
CDK5Q00535 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDK5Q00535 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK5Q00535 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK5Q00535 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK5Q00535 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDK5Q00535 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK5Q00535 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDK5Q00535 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CDK5Q00535 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK5Q00535 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms