Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MIR4321-201ENST00000592276 80 ntBASIC15.62■□□□□ 0.09
YBX1P67809 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.62■□□□□ 0.09
YBX1P67809 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
YBX1P67809 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.62■□□□□ 0.09
YBX1P67809 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
YBX1P67809 AL136982.4-201ENST00000437689 1740 ntBASIC15.62■□□□□ 0.09
YBX1P67809 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.62■□□□□ 0.09
YBX1P67809 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
YBX1P67809 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YBX1P67809 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.62■□□□□ 0.09
YBX1P67809 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YBX1P67809 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
YBX1P67809 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.61■□□□□ 0.09
YBX1P67809 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
YBX1P67809 SSR4P1-203ENST00000599569 2260 ntBASIC15.61■□□□□ 0.09
YBX1P67809 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
YBX1P67809 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.61■□□□□ 0.09
YBX1P67809 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.61■□□□□ 0.09
YBX1P67809 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.61■□□□□ 0.09
YBX1P67809 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.61■□□□□ 0.09
YBX1P67809 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.61■□□□□ 0.09
YBX1P67809 PMS2P2-201ENST00000425039 1128 ntBASIC15.61■□□□□ 0.09
YBX1P67809 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.61■□□□□ 0.09
YBX1P67809 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.61■□□□□ 0.09
YBX1P67809 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.61■□□□□ 0.09
YBX1P67809 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.61■□□□□ 0.09
YBX1P67809 AL512356.2-201ENST00000546955 174 ntBASIC15.61■□□□□ 0.09
YBX1P67809 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.61■□□□□ 0.09
YBX1P67809 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.61■□□□□ 0.09
YBX1P67809 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.61■□□□□ 0.09
YBX1P67809 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.61■□□□□ 0.09
YBX1P67809 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 TSPY26P-202ENST00000565928 3884 ntBASIC15.61■□□□□ 0.09
YBX1P67809 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.61■□□□□ 0.09
YBX1P67809 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
YBX1P67809 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
YBX1P67809 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
YBX1P67809 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
YBX1P67809 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.61■□□□□ 0.09
YBX1P67809 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YBX1P67809 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
YBX1P67809 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.6■□□□□ 0.09
YBX1P67809 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.6■□□□□ 0.09
YBX1P67809 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.6■□□□□ 0.09
YBX1P67809 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.6■□□□□ 0.09
YBX1P67809 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
YBX1P67809 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.6■□□□□ 0.09
YBX1P67809 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
YBX1P67809 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.6■□□□□ 0.09
YBX1P67809 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
YBX1P67809 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.6■□□□□ 0.09
YBX1P67809 AC106028.4-201ENST00000614509 607 ntBASIC15.6■□□□□ 0.09
YBX1P67809 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.6■□□□□ 0.09
YBX1P67809 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.6■□□□□ 0.09
YBX1P67809 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.6■□□□□ 0.09
YBX1P67809 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
YBX1P67809 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.6■□□□□ 0.09
YBX1P67809 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
YBX1P67809 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
YBX1P67809 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
YBX1P67809 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
YBX1P67809 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms