Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS4XP62701 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS4XP62701 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS4XP62701 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS4XP62701 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS4XP62701 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.47□□□□□ -0.09
RPS4XP62701 AC092850.2-201ENST00000623821 2697 ntBASIC14.47□□□□□ -0.09
RPS4XP62701 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS4XP62701 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS4XP62701 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RPS4XP62701 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.47□□□□□ -0.09
RPS4XP62701 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.46□□□□□ -0.09
RPS4XP62701 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
RPS4XP62701 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
RPS4XP62701 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.46□□□□□ -0.09
RPS4XP62701 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.46□□□□□ -0.09
RPS4XP62701 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.46□□□□□ -0.09
RPS4XP62701 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.46□□□□□ -0.09
RPS4XP62701 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.46□□□□□ -0.09
RPS4XP62701 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 MIR346-201ENST00000362234 95 ntBASIC14.46□□□□□ -0.09
RPS4XP62701 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.46□□□□□ -0.09
RPS4XP62701 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.46□□□□□ -0.09
RPS4XP62701 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.46□□□□□ -0.09
RPS4XP62701 AL592309.1-201ENST00000443127 649 ntBASIC14.46□□□□□ -0.09
RPS4XP62701 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RPS4XP62701 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.46□□□□□ -0.09
RPS4XP62701 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.46□□□□□ -0.09
RPS4XP62701 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.46□□□□□ -0.09
RPS4XP62701 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.46□□□□□ -0.09
RPS4XP62701 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.46□□□□□ -0.09
RPS4XP62701 AC243562.1-201ENST00000560672 389 ntBASIC14.46□□□□□ -0.09
RPS4XP62701 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.46□□□□□ -0.09
RPS4XP62701 AL096865.1-201ENST00000606796 927 ntBASIC14.46□□□□□ -0.09
RPS4XP62701 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.46□□□□□ -0.09
RPS4XP62701 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.46□□□□□ -0.09
RPS4XP62701 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.46□□□□□ -0.09
RPS4XP62701 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS4XP62701 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RPS4XP62701 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.46□□□□□ -0.1
RPS4XP62701 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.46□□□□□ -0.1
RPS4XP62701 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
RPS4XP62701 TMBIM7P-203ENST00000641617 1718 ntBASIC14.46□□□□□ -0.1
RPS4XP62701 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RPS4XP62701 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
RPS4XP62701 LINC00554-201ENST00000564841 3011 ntBASIC14.46□□□□□ -0.1
RPS4XP62701 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RPS4XP62701 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPS4XP62701 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RPS4XP62701 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RPS4XP62701 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.46□□□□□ -0.1
RPS4XP62701 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPS4XP62701 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 CICP13-201ENST00000422015 2789 ntBASIC14.45□□□□□ -0.1
RPS4XP62701 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
RPS4XP62701 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.45□□□□□ -0.1
RPS4XP62701 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
RPS4XP62701 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.45□□□□□ -0.1
RPS4XP62701 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.45□□□□□ -0.1
RPS4XP62701 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 KRT18P32-201ENST00000424695 1287 ntBASIC14.45□□□□□ -0.1
RPS4XP62701 CNN2P2-201ENST00000443536 909 ntBASIC14.45□□□□□ -0.1
RPS4XP62701 BCRP1-201ENST00000444246 691 ntBASIC14.45□□□□□ -0.1
RPS4XP62701 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 CNN2P3-201ENST00000450201 906 ntBASIC14.45□□□□□ -0.1
RPS4XP62701 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.45□□□□□ -0.1
RPS4XP62701 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.45□□□□□ -0.1
RPS4XP62701 AL136317.3-201ENST00000618497 906 ntBASIC14.45□□□□□ -0.1
RPS4XP62701 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms