Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2NP61088 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
UBE2NP61088 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
UBE2NP61088 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
UBE2NP61088 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2NP61088 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
UBE2NP61088 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2NP61088 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UBE2NP61088 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 MIR648-201ENST00000385046 94 ntBASIC14.12□□□□□ -0.15
UBE2NP61088 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.12□□□□□ -0.15
UBE2NP61088 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.12□□□□□ -0.15
UBE2NP61088 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.12□□□□□ -0.15
UBE2NP61088 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2NP61088 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 DUX4L27-201ENST00000554796 1261 ntBASIC14.12□□□□□ -0.15
UBE2NP61088 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.12□□□□□ -0.15
UBE2NP61088 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.12□□□□□ -0.15
UBE2NP61088 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.12□□□□□ -0.15
UBE2NP61088 AL158211.3-201ENST00000607385 239 ntBASIC14.12□□□□□ -0.15
UBE2NP61088 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.12□□□□□ -0.15
UBE2NP61088 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
UBE2NP61088 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2NP61088 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
UBE2NP61088 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2NP61088 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.12□□□□□ -0.15
UBE2NP61088 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2NP61088 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UBE2NP61088 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2NP61088 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2NP61088 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2NP61088 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 TREML5P-201ENST00000421694 576 ntBASIC14.11□□□□□ -0.15
UBE2NP61088 BASP1P1-201ENST00000430708 665 ntBASIC14.11□□□□□ -0.15
UBE2NP61088 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
UBE2NP61088 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 AL512638.1-201ENST00000457493 794 ntBASIC14.11□□□□□ -0.15
UBE2NP61088 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.11□□□□□ -0.15
UBE2NP61088 AC027369.6-201ENST00000525520 931 ntBASIC14.11□□□□□ -0.15
UBE2NP61088 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.11□□□□□ -0.15
UBE2NP61088 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.11□□□□□ -0.15
UBE2NP61088 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2NP61088 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
UBE2NP61088 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2NP61088 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2NP61088 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 FO538757.1-201ENST00000623083 1397 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms