Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.46□□□□□ -0.09
SUMO3P55854 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SUMO3P55854 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.46□□□□□ -0.09
SUMO3P55854 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.46□□□□□ -0.09
SUMO3P55854 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SUMO3P55854 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SUMO3P55854 MIR943-201ENST00000401286 94 ntBASIC14.46□□□□□ -0.09
SUMO3P55854 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.46□□□□□ -0.09
SUMO3P55854 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.46□□□□□ -0.09
SUMO3P55854 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.46□□□□□ -0.09
SUMO3P55854 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.46□□□□□ -0.09
SUMO3P55854 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.46□□□□□ -0.09
SUMO3P55854 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.46□□□□□ -0.09
SUMO3P55854 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.46□□□□□ -0.09
SUMO3P55854 AC027369.6-201ENST00000525520 931 ntBASIC14.46□□□□□ -0.09
SUMO3P55854 ZNF890P-202ENST00000530367 1156 ntBASIC14.46□□□□□ -0.09
SUMO3P55854 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.46□□□□□ -0.09
SUMO3P55854 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.46□□□□□ -0.09
SUMO3P55854 AC097359.3-201ENST00000603982 1210 ntBASIC14.46□□□□□ -0.09
SUMO3P55854 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
SUMO3P55854 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SUMO3P55854 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.46□□□□□ -0.09
SUMO3P55854 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SUMO3P55854 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SUMO3P55854 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SUMO3P55854 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.46□□□□□ -0.1
SUMO3P55854 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SUMO3P55854 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SUMO3P55854 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SUMO3P55854 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SUMO3P55854 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.46□□□□□ -0.1
SUMO3P55854 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.45□□□□□ -0.1
SUMO3P55854 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.45□□□□□ -0.1
SUMO3P55854 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SUMO3P55854 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SUMO3P55854 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.45□□□□□ -0.1
SUMO3P55854 AC087499.5-201ENST00000452760 1342 ntBASIC14.45□□□□□ -0.1
SUMO3P55854 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SUMO3P55854 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.45□□□□□ -0.1
SUMO3P55854 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.45□□□□□ -0.1
SUMO3P55854 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SUMO3P55854 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SUMO3P55854 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
SUMO3P55854 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SUMO3P55854 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SUMO3P55854 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SUMO3P55854 TREML5P-201ENST00000421694 576 ntBASIC14.45□□□□□ -0.1
SUMO3P55854 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.45□□□□□ -0.1
SUMO3P55854 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SUMO3P55854 AC092580.3-201ENST00000430932 139 ntBASIC14.45□□□□□ -0.1
SUMO3P55854 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.45□□□□□ -0.1
SUMO3P55854 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.45□□□□□ -0.1
SUMO3P55854 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.45□□□□□ -0.1
SUMO3P55854 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.45□□□□□ -0.1
SUMO3P55854 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SUMO3P55854 MIR4313-201ENST00000580760 101 ntBASIC14.45□□□□□ -0.1
SUMO3P55854 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.45□□□□□ -0.1
SUMO3P55854 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SUMO3P55854 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.45□□□□□ -0.1
SUMO3P55854 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.45□□□□□ -0.1
SUMO3P55854 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SUMO3P55854 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
SUMO3P55854 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SUMO3P55854 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.45□□□□□ -0.1
SUMO3P55854 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SUMO3P55854 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
SUMO3P55854 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 AC007950.2-201ENST00000615045 2347 ntBASIC14.44□□□□□ -0.1
SUMO3P55854 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SUMO3P55854 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.44□□□□□ -0.1
SUMO3P55854 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.44□□□□□ -0.1
SUMO3P55854 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.44□□□□□ -0.1
SUMO3P55854 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.44□□□□□ -0.1
SUMO3P55854 AC241585.1-201ENST00000433527 519 ntBASIC14.44□□□□□ -0.1
SUMO3P55854 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.44□□□□□ -0.1
SUMO3P55854 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.44□□□□□ -0.1
SUMO3P55854 AC097493.3-201ENST00000509725 367 ntBASIC14.44□□□□□ -0.1
SUMO3P55854 IGHV3-42-201ENST00000520410 361 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms