Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDH12P55289 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH12P55289 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH12P55289 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDH12P55289 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 AL365209.1-201ENST00000624418 6473 ntBASIC14.98□□□□□ -0.01
CDH12P55289 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CDH12P55289 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH12P55289 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH12P55289 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH12P55289 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH12P55289 AC087481.3-201ENST00000602886 1894 ntBASIC14.98□□□□□ -0.01
CDH12P55289 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CDH12P55289 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH12P55289 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH12P55289 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH12P55289 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH12P55289 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH12P55289 TPM4P1-201ENST00000436100 807 ntBASIC14.98□□□□□ -0.01
CDH12P55289 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 AC079776.4-201ENST00000511039 504 ntBASIC14.98□□□□□ -0.01
CDH12P55289 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH12P55289 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH12P55289 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH12P55289 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH12P55289 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH12P55289 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH12P55289 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH12P55289 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 AC099063.4-201ENST00000641099 1602 ntBASIC14.98□□□□□ -0.01
CDH12P55289 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH12P55289 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH12P55289 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH12P55289 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH12P55289 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH12P55289 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 AL109954.1-202ENST00000564051 2148 ntBASIC14.98□□□□□ -0.01
CDH12P55289 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH12P55289 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
CDH12P55289 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH12P55289 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH12P55289 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDH12P55289 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH12P55289 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDH12P55289 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH12P55289 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH12P55289 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH12P55289 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH12P55289 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH12P55289 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH12P55289 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH12P55289 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.97□□□□□ -0.01
CDH12P55289 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH12P55289 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH12P55289 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH12P55289 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
CDH12P55289 AL009183.1-201ENST00000603760 355 ntBASIC14.97□□□□□ -0.01
CDH12P55289 AC023141.13-201ENST00000604991 943 ntBASIC14.97□□□□□ -0.01
CDH12P55289 AC007064.4-201ENST00000637740 555 ntBASIC14.97□□□□□ -0.01
CDH12P55289 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDH12P55289 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms