Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PDE1AP54750 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.5■□□□□ 0.71
PDE1AP54750 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.5■□□□□ 0.71
PDE1AP54750 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.5■□□□□ 0.71
PDE1AP54750 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE1AP54750 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE1AP54750 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE1AP54750 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.5■□□□□ 0.71
PDE1AP54750 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE1AP54750 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.5■□□□□ 0.71
PDE1AP54750 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 AC022532.1-201ENST00000624563 1728 ntBASIC19.5■□□□□ 0.71
PDE1AP54750 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE1AP54750 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.5■□□□□ 0.71
PDE1AP54750 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDE1AP54750 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PDE1AP54750 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PDE1AP54750 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE1AP54750 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PDE1AP54750 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE1AP54750 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE1AP54750 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PDE1AP54750 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.49■□□□□ 0.71
PDE1AP54750 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
PDE1AP54750 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.49■□□□□ 0.71
PDE1AP54750 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.49■□□□□ 0.71
PDE1AP54750 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 AC136604.1-201ENST00000418535 575 ntBASIC19.49■□□□□ 0.71
PDE1AP54750 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.49■□□□□ 0.71
PDE1AP54750 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE1AP54750 AL079307.3-201ENST00000556114 283 ntBASIC19.49■□□□□ 0.71
PDE1AP54750 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PDE1AP54750 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.49■□□□□ 0.71
PDE1AP54750 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PDE1AP54750 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.49■□□□□ 0.71
PDE1AP54750 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.49■□□□□ 0.71
PDE1AP54750 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.49■□□□□ 0.71
PDE1AP54750 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDE1AP54750 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE1AP54750 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDE1AP54750 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 AC104640.1-201ENST00000562617 2109 ntBASIC19.49■□□□□ 0.71
PDE1AP54750 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PDE1AP54750 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
PDE1AP54750 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PDE1AP54750 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.49■□□□□ 0.71
PDE1AP54750 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDE1AP54750 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE1AP54750 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.48■□□□□ 0.71
PDE1AP54750 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.48■□□□□ 0.71
PDE1AP54750 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.48■□□□□ 0.71
PDE1AP54750 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PDE1AP54750 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.48■□□□□ 0.71
PDE1AP54750 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
PDE1AP54750 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.48■□□□□ 0.71
PDE1AP54750 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDE1AP54750 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.48■□□□□ 0.71
PDE1AP54750 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.48■□□□□ 0.71
PDE1AP54750 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PDE1AP54750 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE1AP54750 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.48■□□□□ 0.71
PDE1AP54750 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.48■□□□□ 0.71
PDE1AP54750 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.48■□□□□ 0.71
PDE1AP54750 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.48■□□□□ 0.71
PDE1AP54750 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.48■□□□□ 0.71
PDE1AP54750 AC139530.3-201ENST00000620344 690 ntBASIC19.48■□□□□ 0.71
PDE1AP54750 Z92544.3-201ENST00000624747 417 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms