Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.62■□□□□ 0.41
PMS1P54277 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PMS1P54277 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
PMS1P54277 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.62■□□□□ 0.41
PMS1P54277 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PMS1P54277 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 NFIC-211ENST00000641145 8399 ntBASIC17.62■□□□□ 0.41
PMS1P54277 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PMS1P54277 HLA-H-201ENST00000383620 1096 ntBASIC17.62■□□□□ 0.41
PMS1P54277 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 FAM58DP-201ENST00000428076 619 ntBASIC17.62■□□□□ 0.41
PMS1P54277 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.62■□□□□ 0.41
PMS1P54277 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.62■□□□□ 0.41
PMS1P54277 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.62■□□□□ 0.41
PMS1P54277 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PMS1P54277 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
PMS1P54277 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PMS1P54277 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PMS1P54277 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 AP002414.2-201ENST00000591780 3365 ntBASIC17.62■□□□□ 0.41
PMS1P54277 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 AC138035.3-201ENST00000622706 2791 ntBASIC17.62■□□□□ 0.41
PMS1P54277 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PMS1P54277 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 TMBIM7P-203ENST00000641617 1718 ntBASIC17.61■□□□□ 0.41
PMS1P54277 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.61■□□□□ 0.41
PMS1P54277 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.61■□□□□ 0.41
PMS1P54277 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 AC004987.2-201ENST00000395959 1148 ntBASIC17.61■□□□□ 0.41
PMS1P54277 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.61■□□□□ 0.41
PMS1P54277 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PMS1P54277 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.61■□□□□ 0.41
PMS1P54277 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PMS1P54277 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.61■□□□□ 0.41
PMS1P54277 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.61■□□□□ 0.41
PMS1P54277 AC093520.2-201ENST00000561830 333 ntBASIC17.61■□□□□ 0.41
PMS1P54277 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
PMS1P54277 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.61■□□□□ 0.41
PMS1P54277 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.61■□□□□ 0.41
PMS1P54277 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PMS1P54277 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PMS1P54277 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.61■□□□□ 0.41
PMS1P54277 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PMS1P54277 TNRC18P2-201ENST00000417666 2714 ntBASIC17.61■□□□□ 0.41
PMS1P54277 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.61■□□□□ 0.41
PMS1P54277 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.61■□□□□ 0.41
PMS1P54277 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
PMS1P54277 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.6■□□□□ 0.41
PMS1P54277 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.6■□□□□ 0.41
PMS1P54277 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 AL109954.1-202ENST00000564051 2148 ntBASIC17.6■□□□□ 0.41
PMS1P54277 AC006486.2-201ENST00000624246 2199 ntBASIC17.6■□□□□ 0.41
PMS1P54277 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PMS1P54277 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PMS1P54277 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
PMS1P54277 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.6■□□□□ 0.41
PMS1P54277 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.6■□□□□ 0.41
PMS1P54277 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.6■□□□□ 0.41
PMS1P54277 CEND1P1-201ENST00000451006 455 ntBASIC17.6■□□□□ 0.41
PMS1P54277 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.6■□□□□ 0.41
PMS1P54277 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.6■□□□□ 0.41
PMS1P54277 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.6■□□□□ 0.41
PMS1P54277 RARRES2P9-201ENST00000565168 469 ntBASIC17.6■□□□□ 0.41
PMS1P54277 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PMS1P54277 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.6■□□□□ 0.41
PMS1P54277 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms