Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CR382287.1-201ENST00000623954 586 ntBASIC19.56■□□□□ 0.72
NUP98P52948 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUP98P52948 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUP98P52948 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUP98P52948 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
NUP98P52948 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUP98P52948 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NUP98P52948 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.56■□□□□ 0.72
NUP98P52948 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NUP98P52948 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NUP98P52948 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUP98P52948 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUP98P52948 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUP98P52948 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUP98P52948 PFN1P12-201ENST00000455938 534 ntBASIC19.55■□□□□ 0.72
NUP98P52948 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUP98P52948 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUP98P52948 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUP98P52948 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.55■□□□□ 0.72
NUP98P52948 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NUP98P52948 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.55■□□□□ 0.72
NUP98P52948 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NUP98P52948 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
NUP98P52948 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
NUP98P52948 AL133338.1-201ENST00000565695 1517 ntBASIC19.55■□□□□ 0.72
NUP98P52948 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.55■□□□□ 0.72
NUP98P52948 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.55■□□□□ 0.72
NUP98P52948 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.55■□□□□ 0.72
NUP98P52948 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.55■□□□□ 0.72
NUP98P52948 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.55■□□□□ 0.72
NUP98P52948 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NUP98P52948 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUP98P52948 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUP98P52948 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUP98P52948 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUP98P52948 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.55■□□□□ 0.72
NUP98P52948 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.54■□□□□ 0.72
NUP98P52948 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.54■□□□□ 0.72
NUP98P52948 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
NUP98P52948 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.54■□□□□ 0.72
NUP98P52948 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.54■□□□□ 0.72
NUP98P52948 AL139099.5-201ENST00000635274 300 ntBASIC19.54■□□□□ 0.72
NUP98P52948 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.54■□□□□ 0.72
NUP98P52948 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.54■□□□□ 0.72
NUP98P52948 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
NUP98P52948 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.54■□□□□ 0.72
NUP98P52948 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP98P52948 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
NUP98P52948 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.53■□□□□ 0.72
NUP98P52948 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
NUP98P52948 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.53■□□□□ 0.72
NUP98P52948 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.53■□□□□ 0.72
NUP98P52948 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.53■□□□□ 0.72
NUP98P52948 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.53■□□□□ 0.72
NUP98P52948 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.53■□□□□ 0.72
NUP98P52948 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 AC008687.7-202ENST00000637404 953 ntBASIC19.53■□□□□ 0.72
NUP98P52948 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
NUP98P52948 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
NUP98P52948 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 LINC02447-202ENST00000501888 2146 ntBASIC19.53■□□□□ 0.72
NUP98P52948 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.53■□□□□ 0.72
NUP98P52948 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.53■□□□□ 0.72
NUP98P52948 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
NUP98P52948 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NUP98P52948 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.53■□□□□ 0.72
NUP98P52948 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms