Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRIM2P49643 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.33■□□□□ 0.05
PRIM2P49643 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRIM2P49643 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRIM2P49643 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRIM2P49643 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PRIM2P49643 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PRIM2P49643 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PRIM2P49643 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRIM2P49643 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
PRIM2P49643 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRIM2P49643 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.33■□□□□ 0.05
PRIM2P49643 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PRIM2P49643 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.33■□□□□ 0.04
PRIM2P49643 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.33■□□□□ 0.04
PRIM2P49643 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.33■□□□□ 0.04
PRIM2P49643 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PRIM2P49643 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.33■□□□□ 0.04
PRIM2P49643 AC074386.1-202ENST00000463561 864 ntBASIC15.33■□□□□ 0.04
PRIM2P49643 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.33■□□□□ 0.04
PRIM2P49643 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.33■□□□□ 0.04
PRIM2P49643 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.33■□□□□ 0.04
PRIM2P49643 PDPK2P-202ENST00000562415 1191 ntBASIC15.33■□□□□ 0.04
PRIM2P49643 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.33■□□□□ 0.04
PRIM2P49643 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.33■□□□□ 0.04
PRIM2P49643 FAM197Y3-203ENST00000618346 717 ntBASIC15.33■□□□□ 0.04
PRIM2P49643 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.33■□□□□ 0.04
PRIM2P49643 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.33■□□□□ 0.04
PRIM2P49643 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PRIM2P49643 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PRIM2P49643 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
PRIM2P49643 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRIM2P49643 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.32■□□□□ 0.04
PRIM2P49643 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PRIM2P49643 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRIM2P49643 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.32■□□□□ 0.04
PRIM2P49643 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.32■□□□□ 0.04
PRIM2P49643 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRIM2P49643 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PRIM2P49643 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRIM2P49643 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.32■□□□□ 0.04
PRIM2P49643 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.32■□□□□ 0.04
PRIM2P49643 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.32■□□□□ 0.04
PRIM2P49643 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PRIM2P49643 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRIM2P49643 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
PRIM2P49643 AC002056.1-201ENST00000395613 760 ntBASIC15.32■□□□□ 0.04
PRIM2P49643 AL022342.1-201ENST00000400363 863 ntBASIC15.32■□□□□ 0.04
PRIM2P49643 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.32■□□□□ 0.04
PRIM2P49643 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.32■□□□□ 0.04
PRIM2P49643 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.32■□□□□ 0.04
PRIM2P49643 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.32■□□□□ 0.04
PRIM2P49643 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.32■□□□□ 0.04
PRIM2P49643 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PRIM2P49643 AC140113.2-201ENST00000604370 208 ntBASIC15.32■□□□□ 0.04
PRIM2P49643 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.32■□□□□ 0.04
PRIM2P49643 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRIM2P49643 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRIM2P49643 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRIM2P49643 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRIM2P49643 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.32■□□□□ 0.04
PRIM2P49643 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRIM2P49643 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRIM2P49643 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRIM2P49643 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRIM2P49643 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRIM2P49643 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.32■□□□□ 0.04
PRIM2P49643 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRIM2P49643 AC016027.1-202ENST00000607927 1699 ntBASIC15.32■□□□□ 0.04
PRIM2P49643 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRIM2P49643 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PRIM2P49643 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.31■□□□□ 0.04
PRIM2P49643 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms