Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 AC139749.1-202ENST00000617529 3139 ntBASIC14.3□□□□□ -0.12
SRP9P49458 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SRP9P49458 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.3□□□□□ -0.12
SRP9P49458 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 RHOQP3-201ENST00000437982 621 ntBASIC14.3□□□□□ -0.12
SRP9P49458 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.3□□□□□ -0.12
SRP9P49458 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.3□□□□□ -0.12
SRP9P49458 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
SRP9P49458 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SRP9P49458 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.3□□□□□ -0.12
SRP9P49458 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.3□□□□□ -0.12
SRP9P49458 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 MIR4515-201ENST00000584082 81 ntBASIC14.3□□□□□ -0.12
SRP9P49458 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.3□□□□□ -0.12
SRP9P49458 ACTL9-202ENST00000612068 1252 ntBASIC14.3□□□□□ -0.12
SRP9P49458 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.3□□□□□ -0.12
SRP9P49458 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.3□□□□□ -0.12
SRP9P49458 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.3□□□□□ -0.12
SRP9P49458 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SRP9P49458 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SRP9P49458 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.3□□□□□ -0.12
SRP9P49458 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.3□□□□□ -0.12
SRP9P49458 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.3□□□□□ -0.12
SRP9P49458 AC012569.1-201ENST00000591191 1524 ntBASIC14.3□□□□□ -0.12
SRP9P49458 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 AC006277.1-201ENST00000624348 1610 ntBASIC14.3□□□□□ -0.12
SRP9P49458 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.29□□□□□ -0.12
SRP9P49458 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
SRP9P49458 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SRP9P49458 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SRP9P49458 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.29□□□□□ -0.12
SRP9P49458 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.29□□□□□ -0.12
SRP9P49458 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.29□□□□□ -0.12
SRP9P49458 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.29□□□□□ -0.12
SRP9P49458 AL031432.2-201ENST00000566714 459 ntBASIC14.29□□□□□ -0.12
SRP9P49458 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SRP9P49458 AL928711.1-201ENST00000570165 459 ntBASIC14.29□□□□□ -0.12
SRP9P49458 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 PMS2P7-201ENST00000506558 1336 ntBASIC14.29□□□□□ -0.12
SRP9P49458 BCAR1-209ENST00000546196 1340 ntBASIC14.29□□□□□ -0.12
SRP9P49458 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.29□□□□□ -0.12
SRP9P49458 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.29□□□□□ -0.12
SRP9P49458 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 AC104581.4-201ENST00000623126 3052 ntBASIC14.29□□□□□ -0.12
SRP9P49458 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.29□□□□□ -0.12
SRP9P49458 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SRP9P49458 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRP9P49458 TCAF2P1-201ENST00000291129 2421 ntBASIC14.29□□□□□ -0.12
SRP9P49458 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SRP9P49458 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SRP9P49458 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRP9P49458 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SRP9P49458 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SRP9P49458 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms