Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC10.88□□□□□ -0.67
CXCL5P42830 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.88□□□□□ -0.67
CXCL5P42830 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
CXCL5P42830 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC10.88□□□□□ -0.67
CXCL5P42830 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.88□□□□□ -0.67
CXCL5P42830 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.88□□□□□ -0.67
CXCL5P42830 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 AC016027.1-202ENST00000607927 1699 ntBASIC10.88□□□□□ -0.67
CXCL5P42830 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
CXCL5P42830 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.88□□□□□ -0.67
CXCL5P42830 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CXCL5P42830 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC10.88□□□□□ -0.67
CXCL5P42830 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CXCL5P42830 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 PAN3-AS1-201ENST00000563843 1351 ntBASIC10.88□□□□□ -0.67
CXCL5P42830 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC10.88□□□□□ -0.67
CXCL5P42830 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC10.88□□□□□ -0.67
CXCL5P42830 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CXCL5P42830 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CXCL5P42830 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC10.87□□□□□ -0.67
CXCL5P42830 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC10.87□□□□□ -0.67
CXCL5P42830 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CXCL5P42830 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC10.87□□□□□ -0.67
CXCL5P42830 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC10.87□□□□□ -0.67
CXCL5P42830 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 NMU-205ENST00000511469 756 ntTSL 3 BASIC10.87□□□□□ -0.67
CXCL5P42830 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 IRF8-202ENST00000562492 946 ntTSL 3 BASIC10.87□□□□□ -0.67
CXCL5P42830 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC10.87□□□□□ -0.67
CXCL5P42830 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC10.87□□□□□ -0.67
CXCL5P42830 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC10.87□□□□□ -0.67
CXCL5P42830 SDCCAG3P1-201ENST00000589292 1150 ntBASIC10.87□□□□□ -0.67
CXCL5P42830 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
CXCL5P42830 MTDHP4-201ENST00000600287 670 ntBASIC10.87□□□□□ -0.67
CXCL5P42830 AL365330.1-201ENST00000607459 531 ntBASIC10.87□□□□□ -0.67
CXCL5P42830 AL355877.3-201ENST00000622820 899 ntBASIC10.87□□□□□ -0.67
CXCL5P42830 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC10.87□□□□□ -0.67
CXCL5P42830 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 AC023157.3-201ENST00000619086 2088 ntBASIC10.87□□□□□ -0.67
CXCL5P42830 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 AC012569.1-201ENST00000591191 1524 ntBASIC10.87□□□□□ -0.67
CXCL5P42830 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL5P42830 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 AC126335.2-201ENST00000623362 4637 ntBASIC10.87□□□□□ -0.67
CXCL5P42830 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL5P42830 AC023908.3-201ENST00000564211 3047 ntBASIC10.87□□□□□ -0.67
CXCL5P42830 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL5P42830 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms