Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.9■□□□□ 0.14
HMGCLP35914 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGCLP35914 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HMGCLP35914 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HMGCLP35914 AP003680.1-201ENST00000598970 3660 ntBASIC15.9■□□□□ 0.14
HMGCLP35914 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HMGCLP35914 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGCLP35914 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGCLP35914 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGCLP35914 AC241585.1-201ENST00000433527 519 ntBASIC15.9■□□□□ 0.14
HMGCLP35914 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HMGCLP35914 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HMGCLP35914 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGCLP35914 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGCLP35914 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HMGCLP35914 HNRNPUP1-201ENST00000554987 333 ntBASIC15.9■□□□□ 0.14
HMGCLP35914 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
HMGCLP35914 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGCLP35914 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGCLP35914 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGCLP35914 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HMGCLP35914 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.9■□□□□ 0.14
HMGCLP35914 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGCLP35914 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
HMGCLP35914 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGCLP35914 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGCLP35914 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGCLP35914 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
HMGCLP35914 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGCLP35914 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGCLP35914 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HMGCLP35914 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HMGCLP35914 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HMGCLP35914 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGCLP35914 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGCLP35914 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGCLP35914 IGHV3-42-201ENST00000520410 361 ntBASIC15.89■□□□□ 0.13
HMGCLP35914 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGCLP35914 ZNF890P-202ENST00000530367 1156 ntBASIC15.89■□□□□ 0.13
HMGCLP35914 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGCLP35914 AL512361.1-201ENST00000554200 418 ntBASIC15.89■□□□□ 0.13
HMGCLP35914 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGCLP35914 AC010336.2-201ENST00000564226 506 ntBASIC15.89■□□□□ 0.13
HMGCLP35914 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.89■□□□□ 0.13
HMGCLP35914 AC027796.2-201ENST00000575326 344 ntBASIC15.89■□□□□ 0.13
HMGCLP35914 MIR4313-201ENST00000580760 101 ntBASIC15.89■□□□□ 0.13
HMGCLP35914 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 AL390955.2-201ENST00000603032 514 ntBASIC15.89■□□□□ 0.13
HMGCLP35914 AC097359.3-201ENST00000603982 1210 ntBASIC15.89■□□□□ 0.13
HMGCLP35914 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGCLP35914 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
HMGCLP35914 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGCLP35914 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HMGCLP35914 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
HMGCLP35914 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGCLP35914 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HMGCLP35914 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HMGCLP35914 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGCLP35914 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCLP35914 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HMGCLP35914 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGCLP35914 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms