Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 KRT18P25-201ENST00000508931 1278 ntBASIC19.53■□□□□ 0.72
PDE6BP35913 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PDE6BP35913 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.53■□□□□ 0.72
PDE6BP35913 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PDE6BP35913 AC097359.3-201ENST00000603982 1210 ntBASIC19.53■□□□□ 0.72
PDE6BP35913 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
PDE6BP35913 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
PDE6BP35913 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.52■□□□□ 0.72
PDE6BP35913 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.52■□□□□ 0.72
PDE6BP35913 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PDE6BP35913 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.52■□□□□ 0.72
PDE6BP35913 AC134407.2-201ENST00000625089 1978 ntBASIC19.52■□□□□ 0.72
PDE6BP35913 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.52■□□□□ 0.72
PDE6BP35913 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
PDE6BP35913 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.52■□□□□ 0.72
PDE6BP35913 AC004898.1-201ENST00000451057 766 ntBASIC19.52■□□□□ 0.72
PDE6BP35913 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PDE6BP35913 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.52■□□□□ 0.72
PDE6BP35913 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.52■□□□□ 0.72
PDE6BP35913 AC015910.1-201ENST00000579400 975 ntBASIC19.52■□□□□ 0.72
PDE6BP35913 MIR4741-201ENST00000579822 90 ntBASIC19.52■□□□□ 0.72
PDE6BP35913 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.52■□□□□ 0.72
PDE6BP35913 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6BP35913 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.52■□□□□ 0.72
PDE6BP35913 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
PDE6BP35913 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDE6BP35913 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.52■□□□□ 0.71
PDE6BP35913 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDE6BP35913 AC139713.2-201ENST00000641328 2723 ntBASIC19.52■□□□□ 0.71
PDE6BP35913 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PDE6BP35913 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.51■□□□□ 0.71
PDE6BP35913 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
PDE6BP35913 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
PDE6BP35913 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
PDE6BP35913 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.51■□□□□ 0.71
PDE6BP35913 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.51■□□□□ 0.71
PDE6BP35913 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.51■□□□□ 0.71
PDE6BP35913 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.51■□□□□ 0.71
PDE6BP35913 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.51■□□□□ 0.71
PDE6BP35913 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.51■□□□□ 0.71
PDE6BP35913 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.51■□□□□ 0.71
PDE6BP35913 AC145423.3-201ENST00000615987 467 ntBASIC19.51■□□□□ 0.71
PDE6BP35913 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PDE6BP35913 AC138028.6-201ENST00000616106 1482 ntBASIC19.51■□□□□ 0.71
PDE6BP35913 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.51■□□□□ 0.71
PDE6BP35913 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6BP35913 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.5■□□□□ 0.71
PDE6BP35913 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6BP35913 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PDE6BP35913 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PDE6BP35913 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6BP35913 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6BP35913 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.5■□□□□ 0.71
PDE6BP35913 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
PDE6BP35913 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PDE6BP35913 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6BP35913 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6BP35913 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms