Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AL138799.1-201ENST00000448213 1675 ntBASIC21.26■□□□□ 0.99
USP6P35125 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
USP6P35125 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.25■□□□□ 0.99
USP6P35125 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
USP6P35125 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC21.25■□□□□ 0.99
USP6P35125 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
USP6P35125 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
USP6P35125 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC21.25■□□□□ 0.99
USP6P35125 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC21.25■□□□□ 0.99
USP6P35125 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 KRT18P25-201ENST00000508931 1278 ntBASIC21.25■□□□□ 0.99
USP6P35125 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC21.25■□□□□ 0.99
USP6P35125 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.25■□□□□ 0.99
USP6P35125 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
USP6P35125 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 AC069224.1-201ENST00000566372 1715 ntBASIC21.25■□□□□ 0.99
USP6P35125 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC21.25■□□□□ 0.99
USP6P35125 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6P35125 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.25■□□□□ 0.99
USP6P35125 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
USP6P35125 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USP6P35125 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 MIR326-201ENST00000362220 95 ntBASIC21.24■□□□□ 0.99
USP6P35125 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USP6P35125 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC21.24■□□□□ 0.99
USP6P35125 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
USP6P35125 HNRNPA1P48-202ENST00000565308 961 ntBASIC21.24■□□□□ 0.99
USP6P35125 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
USP6P35125 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
USP6P35125 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.24■□□□□ 0.99
USP6P35125 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6P35125 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP6P35125 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC21.23■□□□□ 0.99
USP6P35125 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP6P35125 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP6P35125 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP6P35125 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP6P35125 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
USP6P35125 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP6P35125 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC21.23■□□□□ 0.99
USP6P35125 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
USP6P35125 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC21.23■□□□□ 0.99
USP6P35125 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC21.23■□□□□ 0.99
USP6P35125 MIR3615-201ENST00000581999 87 ntBASIC21.23■□□□□ 0.99
USP6P35125 AC103810.3-201ENST00000583567 96 ntBASIC21.23■□□□□ 0.99
USP6P35125 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP6P35125 AC005695.3-201ENST00000614522 232 ntBASIC21.23■□□□□ 0.99
USP6P35125 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC21.23■□□□□ 0.99
USP6P35125 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC21.23■□□□□ 0.99
USP6P35125 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP6P35125 AC124067.4-201ENST00000519691 2379 ntBASIC21.23■□□□□ 0.99
USP6P35125 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP6P35125 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC21.23■□□□□ 0.99
USP6P35125 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP6P35125 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC21.23■□□□□ 0.99
USP6P35125 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP6P35125 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC21.22■□□□□ 0.99
USP6P35125 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC21.22■□□□□ 0.99
USP6P35125 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
USP6P35125 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC21.22■□□□□ 0.99
USP6P35125 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC21.22■□□□□ 0.99
USP6P35125 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC21.22■□□□□ 0.99
USP6P35125 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC21.22■□□□□ 0.99
USP6P35125 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC21.22■□□□□ 0.99
USP6P35125 PRKN-211ENST00000615065 261 ntTSL 5 BASIC21.22■□□□□ 0.99
USP6P35125 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6P35125 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
USP6P35125 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP6P35125 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6P35125 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP6P35125 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC21.22■□□□□ 0.99
USP6P35125 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms