Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
COL8A2P25067 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.53□□□□□ -0.24
COL8A2P25067 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
COL8A2P25067 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
COL8A2P25067 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.53□□□□□ -0.24
COL8A2P25067 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.53□□□□□ -0.24
COL8A2P25067 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.53□□□□□ -0.24
COL8A2P25067 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.53□□□□□ -0.24
COL8A2P25067 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.53□□□□□ -0.24
COL8A2P25067 SDHAP3-202ENST00000515467 728 ntBASIC13.53□□□□□ -0.24
COL8A2P25067 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.53□□□□□ -0.24
COL8A2P25067 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 AP005018.1-201ENST00000525475 301 ntBASIC13.53□□□□□ -0.24
COL8A2P25067 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.53□□□□□ -0.24
COL8A2P25067 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.53□□□□□ -0.24
COL8A2P25067 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.53□□□□□ -0.24
COL8A2P25067 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.53□□□□□ -0.24
COL8A2P25067 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.53□□□□□ -0.24
COL8A2P25067 AC004461.2-201ENST00000629517 803 ntBASIC13.53□□□□□ -0.24
COL8A2P25067 AL109936.8-201ENST00000641772 604 ntBASIC13.53□□□□□ -0.24
COL8A2P25067 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.53□□□□□ -0.24
COL8A2P25067 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
COL8A2P25067 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
COL8A2P25067 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COL8A2P25067 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
COL8A2P25067 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COL8A2P25067 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.52□□□□□ -0.24
COL8A2P25067 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
COL8A2P25067 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COL8A2P25067 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COL8A2P25067 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
COL8A2P25067 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
COL8A2P25067 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COL8A2P25067 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
COL8A2P25067 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COL8A2P25067 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
COL8A2P25067 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
COL8A2P25067 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 SPDYE19P-201ENST00000338590 713 ntBASIC13.52□□□□□ -0.25
COL8A2P25067 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 FO393414.2-201ENST00000405153 598 ntBASIC13.52□□□□□ -0.25
COL8A2P25067 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.52□□□□□ -0.25
COL8A2P25067 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.52□□□□□ -0.25
COL8A2P25067 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.52□□□□□ -0.25
COL8A2P25067 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.52□□□□□ -0.25
COL8A2P25067 SPDYE18-201ENST00000510091 1050 ntBASIC13.52□□□□□ -0.25
COL8A2P25067 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.52□□□□□ -0.25
COL8A2P25067 AC104794.3-201ENST00000566840 1248 ntBASIC13.52□□□□□ -0.25
COL8A2P25067 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.52□□□□□ -0.25
COL8A2P25067 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.52□□□□□ -0.25
COL8A2P25067 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 AC007950.2-201ENST00000615045 2347 ntBASIC13.52□□□□□ -0.25
COL8A2P25067 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.52□□□□□ -0.25
COL8A2P25067 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.52□□□□□ -0.25
COL8A2P25067 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COL8A2P25067 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.51□□□□□ -0.25
COL8A2P25067 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 AC026691.1-201ENST00000602502 2017 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms