Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.15■□□□□ 0.18
THRAP10827 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
THRAP10827 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 AC067930.6-201ENST00000623257 4947 ntBASIC16.15■□□□□ 0.18
THRAP10827 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
THRAP10827 AC073347.1-201ENST00000421633 2643 ntBASIC16.15■□□□□ 0.18
THRAP10827 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
THRAP10827 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
THRAP10827 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
THRAP10827 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.14■□□□□ 0.17
THRAP10827 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.14■□□□□ 0.17
THRAP10827 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.14■□□□□ 0.17
THRAP10827 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.14■□□□□ 0.17
THRAP10827 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.14■□□□□ 0.17
THRAP10827 FAM58DP-201ENST00000428076 619 ntBASIC16.14■□□□□ 0.17
THRAP10827 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
THRAP10827 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.14■□□□□ 0.17
THRAP10827 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.14■□□□□ 0.17
THRAP10827 AL031055.1-201ENST00000606362 631 ntBASIC16.14■□□□□ 0.17
THRAP10827 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.14■□□□□ 0.17
THRAP10827 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
THRAP10827 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.14■□□□□ 0.17
THRAP10827 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
THRAP10827 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.14■□□□□ 0.17
THRAP10827 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
THRAP10827 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
THRAP10827 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
THRAP10827 AC006058.4-201ENST00000624016 1670 ntBASIC16.14■□□□□ 0.17
THRAP10827 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.14■□□□□ 0.17
THRAP10827 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
THRAP10827 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.13■□□□□ 0.17
THRAP10827 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
THRAP10827 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.13■□□□□ 0.17
THRAP10827 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 AL671710.1-201ENST00000610245 2349 ntBASIC16.13■□□□□ 0.17
THRAP10827 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 WASH6P-202ENST00000359512 1437 ntBASIC16.13■□□□□ 0.17
THRAP10827 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
THRAP10827 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.13■□□□□ 0.17
THRAP10827 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.13■□□□□ 0.17
THRAP10827 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.13■□□□□ 0.17
THRAP10827 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.13■□□□□ 0.17
THRAP10827 GPS2P2-201ENST00000430745 888 ntBASIC16.13■□□□□ 0.17
THRAP10827 CNN2P2-201ENST00000443536 909 ntBASIC16.13■□□□□ 0.17
THRAP10827 BCRP1-201ENST00000444246 691 ntBASIC16.13■□□□□ 0.17
THRAP10827 CNN2P3-201ENST00000450201 906 ntBASIC16.13■□□□□ 0.17
THRAP10827 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.13■□□□□ 0.17
THRAP10827 IGHV3-62-201ENST00000520057 340 ntBASIC16.13■□□□□ 0.17
THRAP10827 AL512356.2-201ENST00000546955 174 ntBASIC16.13■□□□□ 0.17
THRAP10827 AC087641.1-201ENST00000557561 1021 ntBASIC16.13■□□□□ 0.17
THRAP10827 KRT8P23-201ENST00000560090 1207 ntBASIC16.13■□□□□ 0.17
THRAP10827 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.13■□□□□ 0.17
THRAP10827 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
THRAP10827 AC005498.2-205ENST00000593218 784 ntBASIC16.13■□□□□ 0.17
THRAP10827 AL096865.1-201ENST00000606796 927 ntBASIC16.13■□□□□ 0.17
THRAP10827 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms