Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD3DP04234 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.64□□□□□ -0.23
CD3DP04234 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CD3DP04234 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CD3DP04234 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CD3DP04234 SBF1P1-201ENST00000444527 5631 ntBASIC13.64□□□□□ -0.23
CD3DP04234 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.64□□□□□ -0.23
CD3DP04234 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CD3DP04234 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 NUS1P2-201ENST00000417358 873 ntBASIC13.64□□□□□ -0.23
CD3DP04234 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.64□□□□□ -0.23
CD3DP04234 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.64□□□□□ -0.23
CD3DP04234 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.64□□□□□ -0.23
CD3DP04234 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.64□□□□□ -0.23
CD3DP04234 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CD3DP04234 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.64□□□□□ -0.23
CD3DP04234 AC004706.3-202ENST00000621574 984 ntBASIC13.64□□□□□ -0.23
CD3DP04234 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.64□□□□□ -0.23
CD3DP04234 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.64□□□□□ -0.23
CD3DP04234 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.64□□□□□ -0.23
CD3DP04234 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD3DP04234 AC005332.1-201ENST00000577698 1310 ntBASIC13.64□□□□□ -0.23
CD3DP04234 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD3DP04234 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD3DP04234 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.63□□□□□ -0.23
CD3DP04234 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD3DP04234 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.63□□□□□ -0.23
CD3DP04234 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.63□□□□□ -0.23
CD3DP04234 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.63□□□□□ -0.23
CD3DP04234 FGD5P1-202ENST00000614866 2498 ntBASIC13.63□□□□□ -0.23
CD3DP04234 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CD3DP04234 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CD3DP04234 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.63□□□□□ -0.23
CD3DP04234 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.63□□□□□ -0.23
CD3DP04234 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.63□□□□□ -0.23
CD3DP04234 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.63□□□□□ -0.23
CD3DP04234 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.63□□□□□ -0.23
CD3DP04234 AC099336.1-202ENST00000602961 463 ntBASIC13.63□□□□□ -0.23
CD3DP04234 AL139288.1-201ENST00000623748 933 ntBASIC13.63□□□□□ -0.23
CD3DP04234 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CD3DP04234 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.63□□□□□ -0.23
CD3DP04234 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD3DP04234 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms