Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CD74P04233 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.51□□□□□ -0.25
CD74P04233 MTDHP4-201ENST00000600287 670 ntBASIC13.51□□□□□ -0.25
CD74P04233 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.51□□□□□ -0.25
CD74P04233 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 AC134407.2-201ENST00000625089 1978 ntBASIC13.51□□□□□ -0.25
CD74P04233 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CD74P04233 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
CD74P04233 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CD74P04233 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.5□□□□□ -0.25
CD74P04233 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CD74P04233 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.5□□□□□ -0.25
CD74P04233 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.5□□□□□ -0.25
CD74P04233 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.5□□□□□ -0.25
CD74P04233 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
CD74P04233 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 TMPOP1-202ENST00000424642 1267 ntBASIC13.5□□□□□ -0.25
CD74P04233 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.5□□□□□ -0.25
CD74P04233 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.5□□□□□ -0.25
CD74P04233 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 MIR4321-201ENST00000592276 80 ntBASIC13.5□□□□□ -0.25
CD74P04233 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.5□□□□□ -0.25
CD74P04233 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.5□□□□□ -0.25
CD74P04233 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.5□□□□□ -0.25
CD74P04233 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 CICP14-201ENST00000629111 2732 ntBASIC13.5□□□□□ -0.25
CD74P04233 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CD74P04233 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.5□□□□□ -0.25
CD74P04233 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD74P04233 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CD74P04233 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CD74P04233 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CD74P04233 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.49□□□□□ -0.25
CD74P04233 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.49□□□□□ -0.25
CD74P04233 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CD74P04233 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.49□□□□□ -0.25
CD74P04233 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
CD74P04233 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.49□□□□□ -0.25
CD74P04233 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 PMS2P4-201ENST00000412466 1052 ntBASIC13.49□□□□□ -0.25
CD74P04233 RPS15P9-201ENST00000494093 319 ntBASIC13.49□□□□□ -0.25
CD74P04233 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.49□□□□□ -0.25
CD74P04233 RN7SL850P-201ENST00000579959 291 ntBASIC13.49□□□□□ -0.25
CD74P04233 MIR4515-201ENST00000584082 81 ntBASIC13.49□□□□□ -0.25
CD74P04233 AL031055.1-201ENST00000606362 631 ntBASIC13.49□□□□□ -0.25
CD74P04233 AC069148.1-201ENST00000608741 768 ntBASIC13.49□□□□□ -0.25
CD74P04233 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.49□□□□□ -0.25
CD74P04233 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
CD74P04233 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.49□□□□□ -0.25
CD74P04233 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 AC148477.4-201ENST00000613430 1793 ntBASIC13.49□□□□□ -0.25
CD74P04233 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.49□□□□□ -0.25
CD74P04233 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CD74P04233 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.49□□□□□ -0.25
CD74P04233 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.49□□□□□ -0.25
CD74P04233 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms