Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 TEX28P1-201ENST00000613479 1221 ntBASIC17.19■□□□□ 0.34
HLA-DRAP01903 TEX28P2-201ENST00000617764 1221 ntBASIC17.19■□□□□ 0.34
HLA-DRAP01903 AC093512.1-201ENST00000617969 520 ntBASIC17.19■□□□□ 0.34
HLA-DRAP01903 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 MIR943-201ENST00000401286 94 ntBASIC17.18■□□□□ 0.34
HLA-DRAP01903 FO393414.2-201ENST00000405153 598 ntBASIC17.18■□□□□ 0.34
HLA-DRAP01903 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 AC097493.3-201ENST00000509725 367 ntBASIC17.18■□□□□ 0.34
HLA-DRAP01903 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 MIR4313-201ENST00000580760 101 ntBASIC17.18■□□□□ 0.34
HLA-DRAP01903 AL158211.3-201ENST00000607385 239 ntBASIC17.18■□□□□ 0.34
HLA-DRAP01903 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DRAP01903 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DRAP01903 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.17■□□□□ 0.34
HLA-DRAP01903 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 AC027369.6-201ENST00000525520 931 ntBASIC17.17■□□□□ 0.34
HLA-DRAP01903 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 HNRNPUP1-201ENST00000554987 333 ntBASIC17.17■□□□□ 0.34
HLA-DRAP01903 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms