Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TOP3BO95985 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.47■□□□□ 0.23
TOP3BO95985 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TOP3BO95985 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.47■□□□□ 0.23
TOP3BO95985 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TOP3BO95985 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.47■□□□□ 0.23
TOP3BO95985 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TOP3BO95985 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TOP3BO95985 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.46■□□□□ 0.23
TOP3BO95985 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
TOP3BO95985 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.46■□□□□ 0.23
TOP3BO95985 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.46■□□□□ 0.23
TOP3BO95985 AC073347.1-201ENST00000421633 2643 ntBASIC16.46■□□□□ 0.23
TOP3BO95985 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TOP3BO95985 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.46■□□□□ 0.23
TOP3BO95985 AC068418.2-201ENST00000577309 3703 ntBASIC16.46■□□□□ 0.23
TOP3BO95985 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.46■□□□□ 0.23
TOP3BO95985 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.46■□□□□ 0.23
TOP3BO95985 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TOP3BO95985 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.46■□□□□ 0.23
TOP3BO95985 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.46■□□□□ 0.23
TOP3BO95985 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.46■□□□□ 0.23
TOP3BO95985 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.46■□□□□ 0.23
TOP3BO95985 AC091167.2-201ENST00000579581 588 ntBASIC16.46■□□□□ 0.23
TOP3BO95985 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TOP3BO95985 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.46■□□□□ 0.23
TOP3BO95985 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.46■□□□□ 0.23
TOP3BO95985 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.46■□□□□ 0.22
TOP3BO95985 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TOP3BO95985 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
TOP3BO95985 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TOP3BO95985 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.46■□□□□ 0.22
TOP3BO95985 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TOP3BO95985 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TOP3BO95985 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TOP3BO95985 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TOP3BO95985 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TOP3BO95985 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.45■□□□□ 0.22
TOP3BO95985 CDC14C-201ENST00000428251 1719 ntBASIC16.45■□□□□ 0.22
TOP3BO95985 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TOP3BO95985 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.45■□□□□ 0.22
TOP3BO95985 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.45■□□□□ 0.22
TOP3BO95985 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TOP3BO95985 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.45■□□□□ 0.22
TOP3BO95985 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.45■□□□□ 0.22
TOP3BO95985 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TOP3BO95985 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.45■□□□□ 0.22
TOP3BO95985 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TOP3BO95985 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.45■□□□□ 0.22
TOP3BO95985 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.45■□□□□ 0.22
TOP3BO95985 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.45■□□□□ 0.22
TOP3BO95985 GPR53P-205ENST00000457298 1084 ntBASIC16.45■□□□□ 0.22
TOP3BO95985 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.45■□□□□ 0.22
TOP3BO95985 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.45■□□□□ 0.22
TOP3BO95985 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.45■□□□□ 0.22
TOP3BO95985 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.45■□□□□ 0.22
TOP3BO95985 AC004233.3-201ENST00000607794 1269 ntBASIC16.45■□□□□ 0.22
TOP3BO95985 MIR6080-201ENST00000617359 66 ntBASIC16.45■□□□□ 0.22
TOP3BO95985 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TOP3BO95985 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TOP3BO95985 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TOP3BO95985 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.45■□□□□ 0.22
TOP3BO95985 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.45■□□□□ 0.22
TOP3BO95985 NFIC-211ENST00000641145 8399 ntBASIC16.45■□□□□ 0.22
TOP3BO95985 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TOP3BO95985 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms