Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 FLJ16779-201ENST00000612722 7638 ntBASIC16.24■□□□□ 0.19
CDH16O75309 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH16O75309 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH16O75309 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH16O75309 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH16O75309 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH16O75309 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH16O75309 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CDH16O75309 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH16O75309 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDH16O75309 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH16O75309 ACTL9-202ENST00000612068 1252 ntBASIC16.24■□□□□ 0.19
CDH16O75309 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH16O75309 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDH16O75309 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDH16O75309 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDH16O75309 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CDH16O75309 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH16O75309 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.24■□□□□ 0.19
CDH16O75309 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 AC026748.1-201ENST00000624349 3251 ntBASIC16.23■□□□□ 0.19
CDH16O75309 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDH16O75309 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH16O75309 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDH16O75309 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CDH16O75309 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH16O75309 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH16O75309 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH16O75309 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.23■□□□□ 0.19
CDH16O75309 SNX18-202ENST00000343017 3140 ntBASIC16.23■□□□□ 0.19
CDH16O75309 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH16O75309 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.23■□□□□ 0.19
CDH16O75309 FAM185BP-201ENST00000443595 716 ntBASIC16.23■□□□□ 0.19
CDH16O75309 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH16O75309 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.23■□□□□ 0.19
CDH16O75309 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDH16O75309 MIR4321-201ENST00000592276 80 ntBASIC16.23■□□□□ 0.19
CDH16O75309 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CDH16O75309 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH16O75309 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDH16O75309 AGAP7P-201ENST00000582299 2062 ntBASIC16.23■□□□□ 0.19
CDH16O75309 AGAP14-201ENST00000624701 2060 ntBASIC16.23■□□□□ 0.19
CDH16O75309 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH16O75309 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH16O75309 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH16O75309 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH16O75309 AC134407.2-201ENST00000625089 1978 ntBASIC16.22■□□□□ 0.19
CDH16O75309 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH16O75309 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH16O75309 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH16O75309 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH16O75309 WASH6P-202ENST00000359512 1437 ntBASIC16.22■□□□□ 0.19
CDH16O75309 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CDH16O75309 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH16O75309 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH16O75309 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CDH16O75309 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH16O75309 MRPL20P1-201ENST00000400819 433 ntBASIC16.22■□□□□ 0.19
CDH16O75309 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDH16O75309 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.22■□□□□ 0.19
CDH16O75309 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CDH16O75309 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH16O75309 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH16O75309 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.22■□□□□ 0.19
CDH16O75309 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH16O75309 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH16O75309 IFNL4P1-201ENST00000607083 540 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms