Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF11O60813 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 Z97205.2-201ENST00000564697 1639 ntBASIC16.19■□□□□ 0.18
PRAMEF11O60813 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 AC044860.1-202ENST00000559481 777 ntBASIC16.19■□□□□ 0.18
PRAMEF11O60813 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF11O60813 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.19■□□□□ 0.18
PRAMEF11O60813 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF11O60813 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF11O60813 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF11O60813 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF11O60813 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 AL607033.1-201ENST00000623900 1599 ntBASIC16.18■□□□□ 0.18
PRAMEF11O60813 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF11O60813 MRPS18AP1-201ENST00000414458 589 ntBASIC16.18■□□□□ 0.18
PRAMEF11O60813 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF11O60813 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 AL109936.8-201ENST00000641772 604 ntBASIC16.18■□□□□ 0.18
PRAMEF11O60813 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF11O60813 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF11O60813 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF11O60813 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.18■□□□□ 0.18
PRAMEF11O60813 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF11O60813 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF11O60813 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEF11O60813 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 AC074338.1-201ENST00000416825 156 ntBASIC16.17■□□□□ 0.18
PRAMEF11O60813 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 INGX-202ENST00000489074 768 ntBASIC16.17■□□□□ 0.18
PRAMEF11O60813 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms