Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 AL596087.1-201ENST00000400979 1969 ntBASIC15.51■□□□□ 0.07
SLC28A2O43868 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SLC28A2O43868 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC28A2O43868 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC28A2O43868 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SLC28A2O43868 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC28A2O43868 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC28A2O43868 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC28A2O43868 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SLC28A2O43868 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC28A2O43868 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC28A2O43868 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC28A2O43868 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.5■□□□□ 0.07
SLC28A2O43868 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 AL161645.1-201ENST00000622716 1255 ntBASIC15.5■□□□□ 0.07
SLC28A2O43868 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC28A2O43868 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SLC28A2O43868 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC28A2O43868 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC28A2O43868 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SLC28A2O43868 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SLC28A2O43868 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC28A2O43868 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 AC022144.1-201ENST00000602255 1580 ntBASIC15.49■□□□□ 0.07
SLC28A2O43868 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SLC28A2O43868 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SLC28A2O43868 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SLC28A2O43868 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.49■□□□□ 0.07
SLC28A2O43868 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC28A2O43868 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC28A2O43868 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 AC022188.1-201ENST00000620960 1664 ntBASIC15.49■□□□□ 0.07
SLC28A2O43868 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SLC28A2O43868 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 AC098614.1-201ENST00000368528 745 ntBASIC15.49■□□□□ 0.07
SLC28A2O43868 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC28A2O43868 ACA64.2-201ENST00000459014 129 ntBASIC15.49■□□□□ 0.07
SLC28A2O43868 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC28A2O43868 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SLC28A2O43868 TP53TG3HP-202ENST00000569755 579 ntBASIC15.49■□□□□ 0.07
SLC28A2O43868 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC28A2O43868 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.49■□□□□ 0.07
SLC28A2O43868 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.49■□□□□ 0.07
SLC28A2O43868 AL645728.2-201ENST00000641974 660 ntBASIC15.49■□□□□ 0.07
SLC28A2O43868 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC28A2O43868 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC28A2O43868 AC100757.3-201ENST00000622361 1406 ntBASIC15.49■□□□□ 0.07
SLC28A2O43868 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC28A2O43868 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms