Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
CLOCKO15516 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLOCKO15516 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.32■□□□□ 0.04
CLOCKO15516 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.32■□□□□ 0.04
CLOCKO15516 PRYP5-201ENST00000451909 266 ntBASIC15.32■□□□□ 0.04
CLOCKO15516 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.32■□□□□ 0.04
CLOCKO15516 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.32■□□□□ 0.04
CLOCKO15516 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.32■□□□□ 0.04
CLOCKO15516 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.32■□□□□ 0.04
CLOCKO15516 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.32■□□□□ 0.04
CLOCKO15516 OR7E14P-202ENST00000530490 1290 ntBASIC15.32■□□□□ 0.04
CLOCKO15516 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLOCKO15516 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.32■□□□□ 0.04
CLOCKO15516 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.32■□□□□ 0.04
CLOCKO15516 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.32■□□□□ 0.04
CLOCKO15516 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
CLOCKO15516 CYP2A7P1-201ENST00000595391 815 ntBASIC15.32■□□□□ 0.04
CLOCKO15516 AC020765.3-201ENST00000613051 740 ntBASIC15.32■□□□□ 0.04
CLOCKO15516 AL022326.1-202ENST00000641533 845 ntBASIC15.32■□□□□ 0.04
CLOCKO15516 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLOCKO15516 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.32■□□□□ 0.04
CLOCKO15516 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
CLOCKO15516 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLOCKO15516 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLOCKO15516 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLOCKO15516 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.32■□□□□ 0.04
CLOCKO15516 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLOCKO15516 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLOCKO15516 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLOCKO15516 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.32■□□□□ 0.04
CLOCKO15516 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLOCKO15516 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLOCKO15516 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLOCKO15516 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CLOCKO15516 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.31■□□□□ 0.04
CLOCKO15516 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 PAWRP1-201ENST00000451083 565 ntBASIC15.31■□□□□ 0.04
CLOCKO15516 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.31■□□□□ 0.04
CLOCKO15516 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.31■□□□□ 0.04
CLOCKO15516 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.31■□□□□ 0.04
CLOCKO15516 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.31■□□□□ 0.04
CLOCKO15516 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.31■□□□□ 0.04
CLOCKO15516 NKAPP1-205ENST00000585790 367 ntBASIC15.31■□□□□ 0.04
CLOCKO15516 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.31■□□□□ 0.04
CLOCKO15516 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CLOCKO15516 AC023511.2-201ENST00000618803 211 ntBASIC15.31■□□□□ 0.04
CLOCKO15516 REXO1L3P-201ENST00000622202 1288 ntBASIC15.31■□□□□ 0.04
CLOCKO15516 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 NCF1C-201ENST00000438382 1427 ntBASIC15.31■□□□□ 0.04
CLOCKO15516 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CLOCKO15516 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CLOCKO15516 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.31■□□□□ 0.04
CLOCKO15516 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLOCKO15516 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLOCKO15516 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLOCKO15516 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLOCKO15516 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.3■□□□□ 0.04
CLOCKO15516 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLOCKO15516 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLOCKO15516 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLOCKO15516 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLOCKO15516 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms