Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 GPX1P2-201ENST00000429271 606 ntBASIC15.63■□□□□ 0.09
HDAC3O15379 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HDAC3O15379 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
HDAC3O15379 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.63■□□□□ 0.09
HDAC3O15379 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.63■□□□□ 0.09
HDAC3O15379 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.63■□□□□ 0.09
HDAC3O15379 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
HDAC3O15379 AL009183.1-201ENST00000603760 355 ntBASIC15.63■□□□□ 0.09
HDAC3O15379 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HDAC3O15379 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HDAC3O15379 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HDAC3O15379 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
HDAC3O15379 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HDAC3O15379 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HDAC3O15379 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
HDAC3O15379 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.63■□□□□ 0.09
HDAC3O15379 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.63■□□□□ 0.09
HDAC3O15379 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HDAC3O15379 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.63■□□□□ 0.09
HDAC3O15379 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.63■□□□□ 0.09
HDAC3O15379 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDAC3O15379 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HDAC3O15379 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HDAC3O15379 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.62■□□□□ 0.09
HDAC3O15379 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.62■□□□□ 0.09
HDAC3O15379 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
HDAC3O15379 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HDAC3O15379 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.62■□□□□ 0.09
HDAC3O15379 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HDAC3O15379 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HDAC3O15379 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
HDAC3O15379 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.62■□□□□ 0.09
HDAC3O15379 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
HDAC3O15379 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
HDAC3O15379 UPK3BP1-201ENST00000428678 509 ntBASIC15.62■□□□□ 0.09
HDAC3O15379 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.62■□□□□ 0.09
HDAC3O15379 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.62■□□□□ 0.09
HDAC3O15379 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.62■□□□□ 0.09
HDAC3O15379 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.62■□□□□ 0.09
HDAC3O15379 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.62■□□□□ 0.09
HDAC3O15379 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 TP73-AS1-207ENST00000624167 988 ntBASIC15.62■□□□□ 0.09
HDAC3O15379 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.62■□□□□ 0.09
HDAC3O15379 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 AC009090.5-201ENST00000624886 2285 ntBASIC15.62■□□□□ 0.09
HDAC3O15379 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
HDAC3O15379 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HDAC3O15379 AC007292.2-201ENST00000593524 1812 ntBASIC15.61■□□□□ 0.09
HDAC3O15379 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HDAC3O15379 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.61■□□□□ 0.09
HDAC3O15379 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HDAC3O15379 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HDAC3O15379 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HDAC3O15379 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HDAC3O15379 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HDAC3O15379 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HDAC3O15379 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HDAC3O15379 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
HDAC3O15379 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.61■□□□□ 0.09
HDAC3O15379 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.61■□□□□ 0.09
HDAC3O15379 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HDAC3O15379 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HDAC3O15379 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HDAC3O15379 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.61■□□□□ 0.09
HDAC3O15379 AC092474.2-201ENST00000424288 719 ntBASIC15.61■□□□□ 0.09
HDAC3O15379 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.61■□□□□ 0.09
HDAC3O15379 HNRNPDP1-201ENST00000439535 754 ntBASIC15.61■□□□□ 0.09
HDAC3O15379 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.61■□□□□ 0.09
HDAC3O15379 AC018712.1-201ENST00000455767 687 ntBASIC15.61■□□□□ 0.09
HDAC3O15379 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HDAC3O15379 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms