Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.79■□□□□ 0.28
SOX1O00570 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX1O00570 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX1O00570 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.79■□□□□ 0.28
SOX1O00570 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SOX1O00570 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX1O00570 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX1O00570 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX1O00570 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX1O00570 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX1O00570 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 AC004987.2-201ENST00000395959 1148 ntBASIC16.78■□□□□ 0.28
SOX1O00570 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX1O00570 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX1O00570 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SOX1O00570 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX1O00570 RBM8B-201ENST00000555532 525 ntBASIC16.78■□□□□ 0.28
SOX1O00570 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX1O00570 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 AL805961.1-203ENST00000641078 1258 ntBASIC16.78■□□□□ 0.28
SOX1O00570 GPAA1P2-202ENST00000606848 1787 ntBASIC16.78■□□□□ 0.28
SOX1O00570 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX1O00570 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SOX1O00570 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SOX1O00570 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 AL691432.1-201ENST00000596308 1422 ntBASIC16.78■□□□□ 0.28
SOX1O00570 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX1O00570 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX1O00570 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX1O00570 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX1O00570 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX1O00570 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SOX1O00570 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SOX1O00570 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX1O00570 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX1O00570 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SOX1O00570 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SOX1O00570 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.77■□□□□ 0.28
SOX1O00570 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.77■□□□□ 0.28
SOX1O00570 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX1O00570 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.77■□□□□ 0.28
SOX1O00570 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX1O00570 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX1O00570 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SOX1O00570 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.77■□□□□ 0.27
SOX1O00570 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
SOX1O00570 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.77■□□□□ 0.27
SOX1O00570 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SOX1O00570 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SOX1O00570 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SOX1O00570 NEFHP1-201ENST00000412845 2629 ntBASIC16.77■□□□□ 0.27
SOX1O00570 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SOX1O00570 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.77■□□□□ 0.27
SOX1O00570 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.77■□□□□ 0.27
SOX1O00570 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 AC090164.3-201ENST00000610780 2143 ntBASIC16.76■□□□□ 0.27
SOX1O00570 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SOX1O00570 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 RPL18P13-201ENST00000478088 569 ntBASIC16.76■□□□□ 0.27
SOX1O00570 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.76■□□□□ 0.27
SOX1O00570 AC013355.1-201ENST00000562625 723 ntBASIC16.76■□□□□ 0.27
SOX1O00570 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.76■□□□□ 0.27
SOX1O00570 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.76■□□□□ 0.27
SOX1O00570 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 MIR4649-201ENST00000582839 64 ntBASIC16.76■□□□□ 0.27
SOX1O00570 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX1O00570 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.76■□□□□ 0.27
SOX1O00570 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.76■□□□□ 0.27
SOX1O00570 AC138466.4-201ENST00000623965 852 ntBASIC16.76■□□□□ 0.27
SOX1O00570 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms