Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 AC020658.6-201ENST00000623564 1870 ntBASIC12.92□□□□□ -0.34
SRRM4A7MD48 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.92□□□□□ -0.34
SRRM4A7MD48 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRRM4A7MD48 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 AC092127.1-201ENST00000567093 3455 ntBASIC12.91□□□□□ -0.34
SRRM4A7MD48 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 FAM220BP-201ENST00000377689 816 ntBASIC12.91□□□□□ -0.34
SRRM4A7MD48 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 HTR5BP-201ENST00000430851 1154 ntBASIC12.91□□□□□ -0.34
SRRM4A7MD48 TIMM8BP1-201ENST00000452384 211 ntBASIC12.91□□□□□ -0.34
SRRM4A7MD48 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRRM4A7MD48 RNA5SP410-201ENST00000516285 106 ntBASIC12.91□□□□□ -0.34
SRRM4A7MD48 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.91□□□□□ -0.34
SRRM4A7MD48 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms