Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 AL354877.1-201ENST00000424412 413 ntBASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 AC114812.1-204ENST00000449669 728 ntBASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88BA6NKF7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 AC078991.1-201ENST00000437297 610 ntBASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 AP001002.3-201ENST00000623482 206 ntBASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88BA6NKF7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM88BA6NKF7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM88BA6NKF7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM88BA6NKF7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM88BA6NKF7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.27■□□□□ 0.51
TMEM88BA6NKF7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 AL157791.1-201ENST00000553667 1699 ntBASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 RTN3P1-201ENST00000536295 711 ntBASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 AC103988.2-201ENST00000561804 725 ntBASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 AL450472.2-201ENST00000603663 1156 ntBASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 ENPP7P14-201ENST00000621765 1040 ntBASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM88BA6NKF7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 RNU1-114P-201ENST00000365297 166 ntBASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 AC116345.2-201ENST00000512837 523 ntBASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 RN7SL713P-201ENST00000582127 302 ntBASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms