Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 KRT18P2-201ENST00000447938 1258 ntBASIC17.04■□□□□ 0.32
RCCD1A6NED2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 KRT126P-201ENST00000549467 1181 ntBASIC17.04■□□□□ 0.32
RCCD1A6NED2 AC018845.2-201ENST00000568326 409 ntBASIC17.04■□□□□ 0.32
RCCD1A6NED2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 AC061975.2-201ENST00000581722 295 ntBASIC17.04■□□□□ 0.32
RCCD1A6NED2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 AC004877.2-201ENST00000623941 599 ntBASIC17.04■□□□□ 0.32
RCCD1A6NED2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 REXO1L1P-202ENST00000608646 1974 ntBASIC17.04■□□□□ 0.32
RCCD1A6NED2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.03■□□□□ 0.32
RCCD1A6NED2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.03■□□□□ 0.32
RCCD1A6NED2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RCCD1A6NED2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCCD1A6NED2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCCD1A6NED2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCCD1A6NED2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 LINC00552-201ENST00000625151 2579 ntBASIC17.02■□□□□ 0.32
RCCD1A6NED2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCCD1A6NED2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCCD1A6NED2 BCAR1-209ENST00000546196 1340 ntBASIC17.02■□□□□ 0.32
RCCD1A6NED2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RCCD1A6NED2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RCCD1A6NED2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCCD1A6NED2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCCD1A6NED2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RCCD1A6NED2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 KRT19P2-202ENST00000557173 1012 ntBASIC17.02■□□□□ 0.32
RCCD1A6NED2 RN7SL510P-201ENST00000581311 263 ntBASIC17.02■□□□□ 0.32
RCCD1A6NED2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 AC007064.4-201ENST00000637740 555 ntBASIC17.02■□□□□ 0.32
RCCD1A6NED2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RCCD1A6NED2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
RCCD1A6NED2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.02■□□□□ 0.31
RCCD1A6NED2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.02■□□□□ 0.31
RCCD1A6NED2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms