Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.22■□□□□ 0.03
LRIT2A6NDA9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 RPL37AP1-201ENST00000412502 279 ntBASIC15.21■□□□□ 0.03
LRIT2A6NDA9 AC107890.1-201ENST00000422478 521 ntBASIC15.21■□□□□ 0.03
LRIT2A6NDA9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 HLA-V-204ENST00000476601 1289 ntBASIC15.21■□□□□ 0.03
LRIT2A6NDA9 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 AC140878.1-201ENST00000565277 250 ntBASIC15.21■□□□□ 0.03
LRIT2A6NDA9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT2A6NDA9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.21■□□□□ 0.02
LRIT2A6NDA9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.02
LRIT2A6NDA9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.21■□□□□ 0.02
LRIT2A6NDA9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRIT2A6NDA9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRIT2A6NDA9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRIT2A6NDA9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 AL080243.2-201ENST00000418783 582 ntBASIC15.2■□□□□ 0.02
LRIT2A6NDA9 AL645939.2-201ENST00000427340 991 ntBASIC15.2■□□□□ 0.02
LRIT2A6NDA9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 HIST3H2BA-201ENST00000436555 524 ntBASIC15.2■□□□□ 0.02
LRIT2A6NDA9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 AC069120.2-201ENST00000524091 540 ntBASIC15.2■□□□□ 0.02
LRIT2A6NDA9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.2■□□□□ 0.02
LRIT2A6NDA9 AC132872.4-202ENST00000622924 2756 ntBASIC15.2■□□□□ 0.02
LRIT2A6NDA9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 FO538757.1-201ENST00000623083 1397 ntBASIC15.2■□□□□ 0.02
LRIT2A6NDA9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.2■□□□□ 0.02
LRIT2A6NDA9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.19■□□□□ 0.02
LRIT2A6NDA9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRIT2A6NDA9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRIT2A6NDA9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRIT2A6NDA9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.19■□□□□ 0.02
LRIT2A6NDA9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LRIT2A6NDA9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.19■□□□□ 0.02
LRIT2A6NDA9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms