Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 CETN4P-206ENST00000642099 2168 ntBASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 KRT8P12-202ENST00000472924 1397 ntBASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC068418.2-201ENST00000577309 3703 ntBASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 FAM86GP-201ENST00000448322 971 ntBASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 KLF2P3-201ENST00000451977 1087 ntBASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 PHKG1P2-201ENST00000457537 863 ntBASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 AL079307.3-201ENST00000556114 283 ntBASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 AL589739.1-201ENST00000607720 493 ntBASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC196A0A1B0GTZ2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 METTL21AP1-201ENST00000438852 635 ntBASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC125807.1-201ENST00000483097 614 ntBASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC051619.7-201ENST00000568314 623 ntBASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC093028.1-201ENST00000622998 982 ntBASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC196A0A1B0GTZ2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC196A0A1B0GTZ2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC196A0A1B0GTZ2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC196A0A1B0GTZ2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCDC196A0A1B0GTZ2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC196A0A1B0GTZ2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms