Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA9Q9Y5G4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA9Q9Y5G4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA9Q9Y5G4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA9Q9Y5G4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA9Q9Y5G4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.03■□□□□ -0
PCDHGA9Q9Y5G4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PCDHGA9Q9Y5G4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 AC093724.1-201ENST00000448659 1027 ntBASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 SDHAP3-202ENST00000515467 728 ntBASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 HILS1-202ENST00000545329 423 ntBASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 AC044860.1-202ENST00000559481 777 ntBASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 AC020765.3-201ENST00000613051 740 ntBASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 AL033527.5-202ENST00000641632 1098 ntBASIC15.02■□□□□ -0
PCDHGA9Q9Y5G4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 AC023824.1-201ENST00000562945 2975 ntBASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 AC132872.4-202ENST00000622924 2756 ntBASIC15.02□□□□□ -0.01
PCDHGA9Q9Y5G4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 SNX33P1-201ENST00000592116 1762 ntBASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 AP002490.2-201ENST00000524791 560 ntBASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 CHCHD2P3-201ENST00000603038 451 ntBASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 AC008494.3-201ENST00000606615 944 ntBASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 AC099568.2-201ENST00000609194 695 ntBASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 AC105917.1-201ENST00000506637 2539 ntBASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA9Q9Y5G4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15□□□□□ -0.01
PCDHGA9Q9Y5G4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA9Q9Y5G4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA9Q9Y5G4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA9Q9Y5G4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15□□□□□ -0.01
PCDHGA9Q9Y5G4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms