Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 KRT8P10-201ENST00000450021 1447 ntBASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 AL928921.2-201ENST00000641325 2442 ntBASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH1Q9Y2L9 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 AP002414.1-201ENST00000391405 1147 ntBASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 AC005332.3-201ENST00000589904 676 ntBASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 GPAA1P2-202ENST00000606848 1787 ntBASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 HSPA7-201ENST00000445535 1927 ntBASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 ST20-AS1-201ENST00000560255 4223 ntBASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCH1Q9Y2L9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 AC007967.3-201ENST00000434308 558 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms