Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 AC140912.1-201ENST00000577171 1054 ntBASIC15.77■□□□□ 0.12
SATB2Q9UPW6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 AL844908.2-201ENST00000609461 460 ntBASIC15.77■□□□□ 0.12
SATB2Q9UPW6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 AC138969.3-201ENST00000546612 1459 ntBASIC15.77■□□□□ 0.11
SATB2Q9UPW6 AC138932.2-201ENST00000548268 1459 ntBASIC15.77■□□□□ 0.11
SATB2Q9UPW6 AC126755.4-201ENST00000549796 1459 ntBASIC15.77■□□□□ 0.11
SATB2Q9UPW6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SATB2Q9UPW6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 NORAD-201ENST00000565493 5339 ntBASIC15.76■□□□□ 0.11
SATB2Q9UPW6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 SBF1P1-201ENST00000444527 5631 ntBASIC15.76■□□□□ 0.11
SATB2Q9UPW6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 GPR53P-205ENST00000457298 1084 ntBASIC15.76■□□□□ 0.11
SATB2Q9UPW6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 RN7SL828P-201ENST00000607615 303 ntBASIC15.76■□□□□ 0.11
SATB2Q9UPW6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SATB2Q9UPW6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 RNF216P1-203ENST00000404404 2427 ntBASIC15.75■□□□□ 0.11
SATB2Q9UPW6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 AL353779.1-201ENST00000434793 351 ntBASIC15.75■□□□□ 0.11
SATB2Q9UPW6 IGHV3-71-201ENST00000523324 359 ntBASIC15.75■□□□□ 0.11
SATB2Q9UPW6 API5-211ENST00000534695 560 ntTSL 5 BASIC15.75■□□□□ 0.11
SATB2Q9UPW6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms