Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 AC018695.7-201ENST00000624587 2492 ntBASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 RPL37AP1-201ENST00000412502 279 ntBASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 AP005018.1-201ENST00000525475 301 ntBASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 TEX28P1-201ENST00000613479 1221 ntBASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 TEX28P2-201ENST00000617764 1221 ntBASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 AC007326.2-201ENST00000624224 7579 ntBASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA1Q9UND3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 AL662799.1-202ENST00000614205 422 ntBASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 AL358472.5-202ENST00000641448 1267 ntBASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 MTHFR-217ENST00000641820 1569 ntBASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA1Q9UND3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 AL513523.2-202ENST00000427283 2040 ntBASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms