Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRIT1Q9P2V4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.45■□□□□ 0.06
LRIT1Q9P2V4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 HILS1-202ENST00000545329 423 ntBASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 WFDC1-204ENST00000613603 549 ntBASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 AL162274.1-201ENST00000617191 1098 ntBASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRIT1Q9P2V4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 TTTY23B-201ENST00000442790 549 ntBASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 MIR6752-201ENST00000618442 71 ntBASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 AL118508.1-201ENST00000613502 2345 ntBASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 CDC14C-201ENST00000428251 1719 ntBASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRIT1Q9P2V4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRIT1Q9P2V4 HAUS4P1-201ENST00000406739 1145 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms