Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.28■□□□□ 0.2
HACD3Q9P035 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.28■□□□□ 0.2
HACD3Q9P035 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.28■□□□□ 0.2
HACD3Q9P035 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.28■□□□□ 0.2
HACD3Q9P035 AC093520.2-201ENST00000561830 333 ntBASIC16.28■□□□□ 0.2
HACD3Q9P035 RARRES2P9-201ENST00000565168 469 ntBASIC16.28■□□□□ 0.2
HACD3Q9P035 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.28■□□□□ 0.2
HACD3Q9P035 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 AP3S2-216ENST00000617003 1561 ntBASIC16.28■□□□□ 0.2
HACD3Q9P035 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 AC008741.2-201ENST00000612792 3115 ntBASIC16.28■□□□□ 0.2
HACD3Q9P035 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HACD3Q9P035 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.28■□□□□ 0.2
HACD3Q9P035 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
HACD3Q9P035 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HACD3Q9P035 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
HACD3Q9P035 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.27■□□□□ 0.2
HACD3Q9P035 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.27■□□□□ 0.2
HACD3Q9P035 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HACD3Q9P035 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.27■□□□□ 0.2
HACD3Q9P035 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.27■□□□□ 0.2
HACD3Q9P035 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.27■□□□□ 0.2
HACD3Q9P035 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
HACD3Q9P035 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
HACD3Q9P035 ALG1L8P-201ENST00000533887 760 ntBASIC16.27■□□□□ 0.2
HACD3Q9P035 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.27■□□□□ 0.2
HACD3Q9P035 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
HACD3Q9P035 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.27■□□□□ 0.2
HACD3Q9P035 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HACD3Q9P035 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HACD3Q9P035 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HACD3Q9P035 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HACD3Q9P035 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HACD3Q9P035 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HACD3Q9P035 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.27■□□□□ 0.19
HACD3Q9P035 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HACD3Q9P035 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HACD3Q9P035 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HACD3Q9P035 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.27■□□□□ 0.19
HACD3Q9P035 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HACD3Q9P035 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HACD3Q9P035 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.27■□□□□ 0.19
HACD3Q9P035 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HACD3Q9P035 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HACD3Q9P035 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HACD3Q9P035 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HACD3Q9P035 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HACD3Q9P035 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.26■□□□□ 0.19
HACD3Q9P035 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.26■□□□□ 0.19
HACD3Q9P035 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.26■□□□□ 0.19
HACD3Q9P035 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HACD3Q9P035 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.26■□□□□ 0.19
HACD3Q9P035 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HACD3Q9P035 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HACD3Q9P035 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HACD3Q9P035 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.26■□□□□ 0.19
HACD3Q9P035 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.26■□□□□ 0.19
HACD3Q9P035 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.26■□□□□ 0.19
HACD3Q9P035 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.26■□□□□ 0.19
HACD3Q9P035 AC026979.3-201ENST00000607315 403 ntBASIC16.26■□□□□ 0.19
HACD3Q9P035 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 AP001282.1-201ENST00000531301 1499 ntBASIC16.26■□□□□ 0.19
HACD3Q9P035 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HACD3Q9P035 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms