Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCM2LQ9NUG4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 AP002414.3-201ENST00000589352 1468 ntBASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCM2LQ9NUG4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 MTDHP4-201ENST00000600287 670 ntBASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 AL139288.1-201ENST00000623748 933 ntBASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 AL353732.1-201ENST00000569618 1459 ntBASIC15.33■□□□□ 0.04
CCM2LQ9NUG4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 CICP23-201ENST00000605013 2741 ntBASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 CYMP-203ENST00000474680 1263 ntBASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 SNHG9-202ENST00000564014 471 ntBASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 AP001350.2-201ENST00000625104 1094 ntBASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCM2LQ9NUG4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 U82695.1-201ENST00000635752 1889 ntBASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 AC090616.6-203ENST00000579186 1945 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms