Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 HYMAI.1-201ENST00000620949 238 ntBASIC19.11■□□□□ 0.65
RTN4Q9NQC3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN4Q9NQC3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 RNF126P1-202ENST00000569893 925 ntBASIC19.1■□□□□ 0.65
RTN4Q9NQC3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC19.1■□□□□ 0.65
RTN4Q9NQC3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTN4Q9NQC3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 DKFZP434A062-201ENST00000573103 5021 ntBASIC19.09■□□□□ 0.65
RTN4Q9NQC3 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 AC091951.1-201ENST00000512854 2465 ntBASIC19.09■□□□□ 0.65
RTN4Q9NQC3 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 TERF1P1-201ENST00000311003 1181 ntBASIC19.09■□□□□ 0.65
RTN4Q9NQC3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 VENTXP5-201ENST00000523979 775 ntBASIC19.09■□□□□ 0.65
RTN4Q9NQC3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.09■□□□□ 0.65
RTN4Q9NQC3 AC012306.2-201ENST00000609350 630 ntBASIC19.09■□□□□ 0.65
RTN4Q9NQC3 AL121895.1-202ENST00000441208 2701 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RTN4Q9NQC3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms