Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.76■□□□□ 0.75
UPF2Q9HAU5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 RNU1-129P-201ENST00000384064 167 ntBASIC19.75■□□□□ 0.75
UPF2Q9HAU5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 AC136632.2-201ENST00000512891 861 ntBASIC19.75■□□□□ 0.75
UPF2Q9HAU5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 U1.21-201ENST00000580816 167 ntBASIC19.75■□□□□ 0.75
UPF2Q9HAU5 MIR4515-201ENST00000584082 81 ntBASIC19.75■□□□□ 0.75
UPF2Q9HAU5 AC008667.4-201ENST00000607370 168 ntBASIC19.75■□□□□ 0.75
UPF2Q9HAU5 AL365330.1-201ENST00000607459 531 ntBASIC19.75■□□□□ 0.75
UPF2Q9HAU5 AC091076.1-201ENST00000610741 619 ntBASIC19.75■□□□□ 0.75
UPF2Q9HAU5 AL121772.3-201ENST00000610840 674 ntBASIC19.75■□□□□ 0.75
UPF2Q9HAU5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPF2Q9HAU5 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 PMS2P4-201ENST00000412466 1052 ntBASIC19.74■□□□□ 0.75
UPF2Q9HAU5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 MIR3909-201ENST00000579518 119 ntBASIC19.74■□□□□ 0.75
UPF2Q9HAU5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 AL031055.1-201ENST00000606362 631 ntBASIC19.74■□□□□ 0.75
UPF2Q9HAU5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 AC067750.1-201ENST00000608826 6545 ntBASIC19.74■□□□□ 0.75
UPF2Q9HAU5 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.74■□□□□ 0.75
UPF2Q9HAU5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms