Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
PIF1Q9H611 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 U82695.1-201ENST00000635752 1889 ntBASIC15.41■□□□□ 0.06
PIF1Q9H611 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.41■□□□□ 0.06
PIF1Q9H611 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PIF1Q9H611 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PIF1Q9H611 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.41■□□□□ 0.06
PIF1Q9H611 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.41■□□□□ 0.06
PIF1Q9H611 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.4■□□□□ 0.06
PIF1Q9H611 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.4■□□□□ 0.06
PIF1Q9H611 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PIF1Q9H611 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 OR2I1P-210ENST00000642037 4691 ntBASIC15.4■□□□□ 0.06
PIF1Q9H611 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.4■□□□□ 0.06
PIF1Q9H611 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 AC138035.3-201ENST00000622706 2791 ntBASIC15.4■□□□□ 0.06
PIF1Q9H611 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.4■□□□□ 0.06
PIF1Q9H611 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.4■□□□□ 0.06
PIF1Q9H611 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.4■□□□□ 0.06
PIF1Q9H611 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 RPS2P1-201ENST00000434010 821 ntBASIC15.4■□□□□ 0.06
PIF1Q9H611 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.4■□□□□ 0.06
PIF1Q9H611 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.4■□□□□ 0.06
PIF1Q9H611 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.4■□□□□ 0.06
PIF1Q9H611 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.4■□□□□ 0.06
PIF1Q9H611 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.4■□□□□ 0.06
PIF1Q9H611 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.4■□□□□ 0.06
PIF1Q9H611 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 AC107918.4-202ENST00000641623 219 ntBASIC15.4■□□□□ 0.06
PIF1Q9H611 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.4■□□□□ 0.06
PIF1Q9H611 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PIF1Q9H611 AC020658.6-201ENST00000623564 1870 ntBASIC15.4■□□□□ 0.06
PIF1Q9H611 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.39■□□□□ 0.05
PIF1Q9H611 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.39■□□□□ 0.05
PIF1Q9H611 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PIF1Q9H611 AC006058.4-201ENST00000624016 1670 ntBASIC15.39■□□□□ 0.05
PIF1Q9H611 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.39■□□□□ 0.05
PIF1Q9H611 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.39■□□□□ 0.05
PIF1Q9H611 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms