Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 AP006288.1-201ENST00000446065 395 ntBASIC14.81□□□□□ -0.04
TRIM2Q9C040 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 ALG1L5P-201ENST00000482043 771 ntBASIC14.81□□□□□ -0.04
TRIM2Q9C040 FAM86C2P-203ENST00000528684 1004 ntBASIC14.81□□□□□ -0.04
TRIM2Q9C040 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 C20orf181-201ENST00000623918 480 ntBASIC14.81□□□□□ -0.04
TRIM2Q9C040 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM2Q9C040 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM2Q9C040 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 AL365209.1-201ENST00000624418 6473 ntBASIC14.8□□□□□ -0.04
TRIM2Q9C040 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 AL671277.1-201ENST00000429656 993 ntBASIC14.8□□□□□ -0.04
TRIM2Q9C040 DNAJB3-202ENST00000449667 1266 ntBASIC14.8□□□□□ -0.04
TRIM2Q9C040 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 SPTSSB-204ENST00000617024 1292 ntBASIC14.8□□□□□ -0.04
TRIM2Q9C040 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM2Q9C040 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM2Q9C040 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM2Q9C040 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM2Q9C040 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
TRIM2Q9C040 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM2Q9C040 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM2Q9C040 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRIM2Q9C040 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM2Q9C040 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms