Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 ENPP7P5-201ENST00000541031 1031 ntBASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AC135983.4-201ENST00000564116 1262 ntBASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AC036164.1-201ENST00000570544 333 ntBASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AP001002.2-201ENST00000625137 386 ntBASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AD000864.1-201ENST00000624076 2295 ntBASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 REXO1L9P-201ENST00000604264 2108 ntBASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 AC134312.5-201ENST00000568031 1313 ntBASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTNAP3Q9BZ76 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 STK33P1-201ENST00000423835 1218 ntBASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 SPTLC1P5-201ENST00000450718 252 ntBASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 COX5BP1-201ENST00000507622 393 ntBASIC15.23■□□□□ 0.03
CNTNAP3Q9BZ76 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms