Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AL929601.4-201ENST00000613011 1341 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AP001469.3-202ENST00000430259 2014 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AL162377.1-201ENST00000618844 1793 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 C1orf131-202ENST00000366649 1424 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 EED-206ENST00000527888 1422 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 PCDHAC2-203ENST00000615316 3011 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 HSPD1P7-201ENST00000447985 1686 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 NDUFS4-201ENST00000296684 675 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 RNU4-79P-201ENST00000362764 141 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 SNORA75-201ENST00000384158 137 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 RNU6-564P-201ENST00000410983 104 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AL158825.1-201ENST00000414735 521 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 C5orf67-201ENST00000438651 765 ntAPPRIS P2 TSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC009404.1-202ENST00000439955 968 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 PAXBP1P1-201ENST00000449315 447 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC119428.2-201ENST00000449958 850 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 VNN3-210ENST00000450865 596 ntTSL 4 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 RPL7P45-201ENST00000455851 743 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC010878.1-201ENST00000456500 1047 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC092691.2-201ENST00000461787 803 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC092850.1-201ENST00000464655 1109 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC011005.1-201ENST00000467614 1263 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 SETP14-201ENST00000497538 873 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC027343.3-201ENST00000504494 564 ntTSL 4 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 TMED10P1-201ENST00000534816 655 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 TRHDE-AS1-204ENST00000550334 403 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC133561.4-201ENST00000566112 224 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 RPS3AP23-202ENST00000574601 686 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 MIR4466-201ENST00000606121 54 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC011298.3-201ENST00000615796 283 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC091544.8-201ENST00000619490 361 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AL035685.1-201ENST00000636663 812 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 AC008764.10-201ENST00000625135 1830 ntBASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP3-3Q9BYR6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms