Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 AC026150.2-201ENST00000564693 1156 ntBASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 AP001059.3-201ENST00000619053 235 ntBASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 AC104640.1-201ENST00000562617 2109 ntBASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 GGT3P-204ENST00000453783 1664 ntBASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 SPDYE7P-202ENST00000420373 878 ntBASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 ALG1L8P-201ENST00000533887 760 ntBASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 TUBB3P1-201ENST00000405796 1332 ntBASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PCGF1Q9BSM1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PCGF1Q9BSM1 ME2P1-201ENST00000426028 1970 ntBASIC13.52□□□□□ -0.24
PCGF1Q9BSM1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
PCGF1Q9BSM1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
PCGF1Q9BSM1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
PCGF1Q9BSM1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PCGF1Q9BSM1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PCGF1Q9BSM1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
PCGF1Q9BSM1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PCGF1Q9BSM1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 MIR770-201ENST00000390219 98 ntBASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 GPS2P2-201ENST00000430745 888 ntBASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms