Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 AC245100.5-201ENST00000452108 331 ntBASIC18.61■□□□□ 0.57
SLF1Q9BQI6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 AC074044.1-201ENST00000609673 707 ntBASIC18.61■□□□□ 0.57
SLF1Q9BQI6 AC007431.3-201ENST00000623221 587 ntBASIC18.61■□□□□ 0.57
SLF1Q9BQI6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.61■□□□□ 0.57
SLF1Q9BQI6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 AL691432.1-201ENST00000596308 1422 ntBASIC18.6■□□□□ 0.57
SLF1Q9BQI6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 MEP1AP4-201ENST00000423244 1087 ntBASIC18.6■□□□□ 0.57
SLF1Q9BQI6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 AC023310.3-201ENST00000557027 670 ntBASIC18.6■□□□□ 0.57
SLF1Q9BQI6 AC100756.1-201ENST00000562736 682 ntBASIC18.6■□□□□ 0.57
SLF1Q9BQI6 WASH4P-201ENST00000564273 1246 ntBASIC18.6■□□□□ 0.57
SLF1Q9BQI6 AC138749.3-201ENST00000567691 622 ntBASIC18.6■□□□□ 0.57
SLF1Q9BQI6 AC092337.1-201ENST00000568699 1129 ntBASIC18.6■□□□□ 0.57
SLF1Q9BQI6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 AC116165.1-201ENST00000611806 668 ntBASIC18.6■□□□□ 0.57
SLF1Q9BQI6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.6■□□□□ 0.57
SLF1Q9BQI6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.59■□□□□ 0.57
SLF1Q9BQI6 AC004987.2-201ENST00000395959 1148 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms