Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPRD1AQ96P16 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
RPRD1AQ96P16 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.52■□□□□ 0.23
RPRD1AQ96P16 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPRD1AQ96P16 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.52■□□□□ 0.23
RPRD1AQ96P16 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.52■□□□□ 0.23
RPRD1AQ96P16 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 AL139384.1-201ENST00000612143 3047 ntBASIC16.51■□□□□ 0.23
RPRD1AQ96P16 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 AL512361.1-201ENST00000554200 418 ntBASIC16.51■□□□□ 0.23
RPRD1AQ96P16 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 AL844908.2-201ENST00000609461 460 ntBASIC16.51■□□□□ 0.23
RPRD1AQ96P16 AJ011932.1-201ENST00000621707 465 ntBASIC16.51■□□□□ 0.23
RPRD1AQ96P16 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 AC022144.1-201ENST00000602255 1580 ntBASIC16.51■□□□□ 0.23
RPRD1AQ96P16 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPRD1AQ96P16 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 LINC02199-201ENST00000506655 2702 ntBASIC16.5■□□□□ 0.23
RPRD1AQ96P16 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 FO393414.2-201ENST00000405153 598 ntBASIC16.5■□□□□ 0.23
RPRD1AQ96P16 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPRD1AQ96P16 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms