Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.73■□□□□ 0.59
TRIM47Q96LD4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM47Q96LD4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 ACTBP11-201ENST00000436287 1126 ntBASIC18.72■□□□□ 0.59
TRIM47Q96LD4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 AC104989.1-201ENST00000519711 778 ntBASIC18.72■□□□□ 0.59
TRIM47Q96LD4 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.72■□□□□ 0.59
TRIM47Q96LD4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM47Q96LD4 PCDH8P1-201ENST00000428983 2773 ntBASIC18.71■□□□□ 0.59
TRIM47Q96LD4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 AC006449.5-201ENST00000610658 2098 ntBASIC18.71■□□□□ 0.59
TRIM47Q96LD4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 BOLA2P3-201ENST00000404566 256 ntBASIC18.71■□□□□ 0.59
TRIM47Q96LD4 SPDYE17-201ENST00000412399 783 ntBASIC18.71■□□□□ 0.59
TRIM47Q96LD4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 MIR6787-201ENST00000616675 61 ntBASIC18.71■□□□□ 0.59
TRIM47Q96LD4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms