Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 AL450472.2-201ENST00000603663 1156 ntBASIC16.32■□□□□ 0.2
RTP4Q96DX8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 AC026979.3-201ENST00000607315 403 ntBASIC16.32■□□□□ 0.2
RTP4Q96DX8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 AC009090.5-201ENST00000624886 2285 ntBASIC16.32■□□□□ 0.2
RTP4Q96DX8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 RARRES2P9-201ENST00000565168 469 ntBASIC16.31■□□□□ 0.2
RTP4Q96DX8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTP4Q96DX8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RTP4Q96DX8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 HYMAI-201ENST00000635591 3347 ntBASIC16.3■□□□□ 0.2
RTP4Q96DX8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 AL592309.1-201ENST00000443127 649 ntBASIC16.3■□□□□ 0.2
RTP4Q96DX8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 PHKG1P2-201ENST00000457537 863 ntBASIC16.3■□□□□ 0.2
RTP4Q96DX8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 AC097359.3-201ENST00000603982 1210 ntBASIC16.3■□□□□ 0.2
RTP4Q96DX8 LINC02084-201ENST00000606069 1096 ntBASIC16.3■□□□□ 0.2
RTP4Q96DX8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms